RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CNFNQ9BYD5 112 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MSRB1Q9NZV6 116 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 ANK2Q01484 3957 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV3-16A0A0C4DH30 117 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 PRM2P04554 102 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 KRTAP10-11P60412 298 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C1orf158Q8N1D5 194 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TMEM208Q9BTX3 173 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MDFICQ9P1T7 246 aa10.76□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV3OR16-12A0A075B7B8 117 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 A0A1B0GW15 77 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TRGC1P0CF51 173 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 SCRT2Q9NQ03 307 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 MUC4Q99102 2169 aa10.75□□□□□ -0.69
CDK5RAP3-201ENST00000338399 SLAQ13239 276 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 KIAA1644Q3SXP7 199 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TRGV11A0A075B6L2 103 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 G3V4G9 280 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 APCSP02743 223 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CACNG7P62955 275 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 EGFEM1PQ0D2K5 195 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CSTL1Q9H114 145 aa10.74□□□□□ -0.69
CDK5RAP3-201ENST00000338399 M0R381 172 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BKO60814 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BJP06899 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BOP23527 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BBP33778 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BDP58876 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BCP62807 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST2H2BEQ16778 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 GATD1Q8NB37 220 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BHQ93079 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BNQ99877 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 HIST1H2BMQ99879 126 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 LINC00467Q9BRT7 94 aa10.73□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV4-4A0A075B6R2 117 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 LOC102724200A0A096LPH7 203 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 CSNK1G2-AS1Q8NCQ2 148 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 C9orf85Q96MD7 179 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 GOLT1BQ9Y3E0 138 aa10.72□□□□□ -0.69
CDK5RAP3-201ENST00000338399 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
CDK5RAP3-201ENST00000338399 IGHV4-30-4P0DP06 118 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 AZU1P20160 251 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 HOXA5P20719 270 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SAMD5Q5TGI4 173 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 PKD1L1Q8TDX9 2849 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 EVI2AP22794 236 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ZNF415Q09FC8 603 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 AMN1Q8IY45 258 aa10.7□□□□□ -0.7
CDK5RAP3-201ENST00000338399 FAM104BQ5XKR9 115 aa10.69□□□□□ -0.7
CDK5RAP3-201ENST00000338399 NXPH4O95158 308 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SRIP30626 198 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 NDUFA6P56556 154 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ZNF705AQ6ZN79 300 aaPredicted RBP10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SMIM15Q7Z3B0 74 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 C11orf72Q8NBR9 251 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5BA0A0G2JN68 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5BA0A0G2JPC4 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 IFITM10A6NMD0 228 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 APOC4P55056 127 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5AQ8N109 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 KIR2DL5BQ8NHK3 375 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RCHY1Q96PM5 261 aa10.68□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SYT8Q8NBV8 401 aa10.67□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
CDK5RAP3-201ENST00000338399 JPT2Q9H910 190 aa10.67□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RAB4AP20338 218 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ZNF876PQ49A33 203 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 MRPL51Q4U2R6 128 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RNASE8Q8TDE3 154 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 ALKBH7Q9BT30 221 aaPredicted RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RIPPLY3P57055 190 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 TMEM263Q8WUH6 116 aaKnown RBP10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
CDK5RAP3-201ENST00000338399 M0R2P5 195 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 RRN3P1Q2M238 152 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 PYY3Q5JQD4 70 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 SPXQ9BT56 116 aa10.65□□□□□ -0.7
CDK5RAP3-201ENST00000338399 D6R8Y8 96 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 S100A2P29034 98 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DEFB135Q30KP9 77 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 DNAH3Q8TD57 4116 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 SMKR1H3BMG3 65 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 CKS2P33552 79 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 C16orf74Q96GX8 76 aa10.64□□□□□ -0.71
CDK5RAP3-201ENST00000338399 A0A087WWL8 130 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 NCR2O95944 276 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 MGPP08493 103 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
CDK5RAP3-201ENST00000338399 IQCJQ1A5X6 159 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 207.6 ms