RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 GCHFRP30047 84 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 TIRAPP58753 221 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 SUMO1P63165 101 aaKnown RBP7.21□□□□□ -1.26
CAPN3-202ENST00000337571 SERF2P84101 59 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 SMUG1Q53HV7 270 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 OR10J3Q5JRS4 329 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 SAPCD1Q5SSQ6 148 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 PRNTQ86SH4 94 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 SLC25A29Q8N8R3 303 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 OR2G3Q8NGZ4 309 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 RAB24Q969Q5 203 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 PSMG3Q9BT73 122 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-202ENST00000337571 ACTR3CQ9C0K3 210 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-202ENST00000337571 SH3BGRL3Q9H299 93 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 TMEM167BQ9NRX6 74 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 PSG8Q9UQ74 426 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 DNAH5Q8TE73 4624 aa7.21□□□□□ -1.26
CAPN3-202ENST00000337571 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
CAPN3-202ENST00000337571 IGHV3-73A0A0B4J1V6 119 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 TRBV6-4A0A1B0GX49 114 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 GCSHP23434 173 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 FLI1Q01543 452 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-202ENST00000337571 RHOHQ15669 191 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 INO80EQ8NBZ0 244 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-202ENST00000337571 FRZBQ92765 325 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 EPDR1Q9UM22 224 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 TNFSF18Q9UNG2 199 aa7.2□□□□□ -1.26
CAPN3-202ENST00000337571 RS1O15537 224 aa7.19□□□□□ -1.26
CAPN3-202ENST00000337571 MGST1P10620 155 aaKnown RBP7.19□□□□□ -1.26
CAPN3-202ENST00000337571 S100A4P26447 101 aaKnown RBP7.19□□□□□ -1.26
CAPN3-202ENST00000337571 ATP6V0CP27449 155 aa7.19□□□□□ -1.26
CAPN3-202ENST00000337571 ZNF80P51504 273 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-202ENST00000337571 CYB561D1Q8N8Q1 229 aa7.19□□□□□ -1.26
CAPN3-202ENST00000337571 AQP10Q96PS8 301 aa7.19□□□□□ -1.26
CAPN3-202ENST00000337571 FXYD6-FXYD2A0A087WZ82 144 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 IGLV5-52A0A0A0MRZ9 124 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 BORCS7-ASMTA0A0B4J1R7 106 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 IBA57-AS1B1ANH7 110 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 IFNA7P01567 189 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 XGP55808 180 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 KRTAP10-1P60331 282 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 LINC01556Q5JQF7 62 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 TMUB2Q71RG4 321 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 TMEM75Q8N9X5 138 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 ATP6V0E2Q8NHE4 81 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 SUN5Q8TC36 379 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 PTH2Q96A98 100 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 GTSF1LQ9H1H1 148 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 Q9HAA7 133 aa7.18□□□□□ -1.26
CAPN3-202ENST00000337571 A0A1W2PRE2 83 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 PGPEP1LA6NFU8 196 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 FABP5P3A8MUU1 101 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 A8MWV9 139 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 ARPC5O15511 151 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 IGHV3-30P01768 117 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 IGHV3-33P01772 117 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 IGHV3-30-3P0DP02 117 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 IGHV3-30-5P0DP03 117 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 ZNF506Q5JVG8 444 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 LELP1Q5T871 98 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 KCNRGQ8N5I3 272 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 NTN5Q8WTR8 489 aaPredicted RBP7.17□□□□□ -1.26
CAPN3-202ENST00000337571 C9orf85Q96MD7 179 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 TM2D2Q9BX73 214 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 CYTL1Q9NRR1 136 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 C11orf21Q9P2W6 132 aa7.17□□□□□ -1.26
CAPN3-202ENST00000337571 GGTLC3B5MD39 225 aa7.16□□□□□ -1.26
CAPN3-202ENST00000337571 IGLV2-11P01706 119 aa7.16□□□□□ -1.26
CAPN3-202ENST00000337571 Q5VSD8 79 aa7.16□□□□□ -1.26
CAPN3-202ENST00000337571 DPPA3Q6W0C5 159 aa7.16□□□□□ -1.26
CAPN3-202ENST00000337571 ZFP2Q6ZN57 461 aa7.16□□□□□ -1.26
CAPN3-202ENST00000337571 NKX6-2Q9C056 277 aaPredicted RBP7.16□□□□□ -1.26
CAPN3-202ENST00000337571 TRAV34A0A0B4J273 112 aa7.15□□□□□ -1.26
CAPN3-202ENST00000337571 RNASE3P12724 160 aaKnown RBP7.15□□□□□ -1.26
CAPN3-202ENST00000337571 ASIPP42127 132 aa7.15□□□□□ -1.26
CAPN3-202ENST00000337571 UBE2G2P60604 165 aa7.15□□□□□ -1.26
CAPN3-202ENST00000337571 Q8N814 137 aa7.15□□□□□ -1.26
CAPN3-202ENST00000337571 SYT8Q8NBV8 401 aa7.15□□□□□ -1.26
CAPN3-202ENST00000337571 LINC00479Q96M42 142 aa7.15□□□□□ -1.26
CAPN3-202ENST00000337571 A0A087WWC5 75 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 TRAV8-3A0A0A6YYJ7 113 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 CTXND1A0A1B0GTU2 59 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 LRCOL1A6NCL2 159 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 GAGE12JA6NER3 117 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 B4DEV8 164 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 SMR3BP02814 79 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-202ENST00000337571 FGF8P55075 233 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-202ENST00000337571 GAGE1Q13065 139 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 GAGE4Q13068 117 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 GAGE5Q13069 117 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 ZNF345Q14585 488 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 LAGE3Q14657 143 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 GAGE13Q4V321 117 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 TOR2AQ5JU69 321 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 PIK3CD-AS1Q5SR53 167 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 AKR1C8PQ5T2L2 129 aa7.14□□□□□ -1.27
CAPN3-202ENST00000337571 RPL7L1Q6DKI1 246 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms