RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PSMG4Q5JS54 123 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 PRSS3P2Q8NHM4 247 aa9.51□□□□□ -0.89
LIMK1-201ENST00000336180 GNRH2O43555 120 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 PRM2P04554 102 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 MRPL51Q4U2R6 128 aaKnown RBP9.5□□□□□ -0.89
LIMK1-201ENST00000336180 OTOGQ6ZRI0 2925 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 IGLC3P0DOY3 106 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 HIVEP2P31629 2446 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 SETXQ7Z333 2677 aaKnown RBP9.5□□□□□ -0.89
LIMK1-201ENST00000336180 TRBV6-1A0A0K0K1D8 114 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 J3QKU1 62 aa9.5□□□□□ -0.89
LIMK1-201ENST00000336180 FLNBO75369 2602 aaKnown RBP9.5□□□□□ -0.89
LIMK1-201ENST00000336180 NPYP01303 97 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 HOXD3P31249 432 aaPredicted RBP9.49□□□□□ -0.89
LIMK1-201ENST00000336180 CKS2P33552 79 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 RASL11AQ6T310 242 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 MRAP2Q96G30 205 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 B5MCH6 92 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 TAX1BP3O14907 124 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 TSPOP30536 169 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 OR10J6PQ8NGY7 276 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
LIMK1-201ENST00000336180 NAA38Q9BRA0 125 aaKnown RBP9.49□□□□□ -0.89
LIMK1-201ENST00000336180 J3QLI3 93 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 KLK9Q2XQG4 91 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 KLHDC1Q8N7A1 406 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 KLK9Q9UKQ9 250 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 TRAV12-3A0A0B4J271 114 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 C18orf15Q96N68 181 aa9.48□□□□□ -0.89
LIMK1-201ENST00000336180 OR11H12B2RN74 326 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 SOCS3O14543 225 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 KLF5Q13887 457 aaPredicted RBP9.47□□□□□ -0.89
LIMK1-201ENST00000336180 FAM104BQ5XKR9 115 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 C9orf139Q6ZV77 190 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 OR11H1Q8NG94 326 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 OR11H2Q8NH07 326 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 RNF183Q96D59 192 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 MS4A6AQ9H2W1 248 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 TRAV8-6A0A0B4J262 113 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 S100A4P26447 101 aaKnown RBP9.47□□□□□ -0.89
LIMK1-201ENST00000336180 ANXA2RQ3ZCQ2 193 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 SPANXN1Q5VSR9 72 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 ESM1Q9NQ30 184 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 SIGLEC8Q9NYZ4 499 aa9.47□□□□□ -0.89
LIMK1-201ENST00000336180 TSSC4Q9Y5U2 329 aaPredicted RBP9.47□□□□□ -0.89
LIMK1-201ENST00000336180 hDV102S1A0JD36 115 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 LEPROTL1O95214 131 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 IGLC6P0CF74 106 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 TCTEX1D4Q5JR98 221 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 GTF2H5Q6ZYL4 71 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 PSMG3-AS1Q96PY0 264 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 FAM231BA6NCW3 169 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 FSHBP01225 129 aa9.46□□□□□ -0.89
LIMK1-201ENST00000336180 JPT2Q9H910 190 aa9.46□□□□□ -0.9
LIMK1-201ENST00000336180 ANK3Q12955 4377 aaKnown RBP9.45□□□□□ -0.9
LIMK1-201ENST00000336180 C2orf70A6NJV1 201 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 CTRLP40313 264 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
LIMK1-201ENST00000336180 KNCNA6PVL3 124 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 H3BUA1 57 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 HSD52Q0P140 79 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 SPINK13Q1W4C9 94 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 C9orf47Q6ZRZ4 202 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 CITED2Q99967 270 aaPredicted RBP9.45□□□□□ -0.9
LIMK1-201ENST00000336180 AP5S1Q9NUS5 200 aa9.45□□□□□ -0.9
LIMK1-201ENST00000336180 TRAV25A0A0B4J276 109 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 KLHL30-AS1Q8NEE0 82 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 RNF185Q96GF1 192 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 GAGE10A6NGK3 116 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 DNAJC9-AS1A6NH13 148 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 ORMDL3Q8N138 153 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 C14orf178Q8N769 122 aaPredicted RBP9.44□□□□□ -0.9
LIMK1-201ENST00000336180 GAGE12HA6NDE8 117 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 MGPP08493 103 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
LIMK1-201ENST00000336180 LINC01559Q495D7 138 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 MPV17L2Q567V2 206 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 NEGR1Q7Z3B1 354 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 LINC00477Q96M19 166 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 C2CD3Q4AC94 2353 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 LGALS1P09382 135 aaKnown RBP9.43□□□□□ -0.9
LIMK1-201ENST00000336180 Q6ZSV7 163 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 PPDPFQ9H3Y8 114 aa9.43□□□□□ -0.9
LIMK1-201ENST00000336180 MRPS16Q9Y3D3 137 aaKnown RBP9.43□□□□□ -0.9
LIMK1-201ENST00000336180 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
LIMK1-201ENST00000336180 DLX4Q92988 240 aaPredicted RBP9.42□□□□□ -0.9
LIMK1-201ENST00000336180 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
LIMK1-201ENST00000336180 Q6AWC8 147 aa9.42□□□□□ -0.9
LIMK1-201ENST00000336180 TMEM70Q9BUB7 260 aa9.42□□□□□ -0.9
LIMK1-201ENST00000336180 A0A096LNJ9 63 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 OR4C46A6NHA9 309 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 APRG1Q8IVJ8 170 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 A0A087WWL8 130 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 CD7P09564 240 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 IGLL1P15814 213 aa9.41□□□□□ -0.9
LIMK1-201ENST00000336180 LRRC75A-AS1Q8N1F1 130 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms