RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 RNASE3P12724 160 aaKnown RBP14.22□□□□□ -0.13
RFTN1-201ENST00000334133 SLC25A16P16260 332 aa14.21□□□□□ -0.13
RFTN1-201ENST00000334133 DCANP1Q8TF63 244 aa14.21□□□□□ -0.13
RFTN1-201ENST00000334133 NAA38Q9BRA0 125 aaKnown RBP14.21□□□□□ -0.13
RFTN1-201ENST00000334133 IGHV4-4A0A075B6R2 117 aa14.21□□□□□ -0.14
RFTN1-201ENST00000334133 PRRC2AP48634 2157 aaKnown RBP14.21□□□□□ -0.14
RFTN1-201ENST00000334133 DPF1Q92782 380 aa14.21□□□□□ -0.14
RFTN1-201ENST00000334133 TMEM8BA6NDV4 472 aa14.2□□□□□ -0.14
RFTN1-201ENST00000334133 RASL10AQ92737 203 aa14.2□□□□□ -0.14
RFTN1-201ENST00000334133 TMEM97Q5BJF2 176 aa14.2□□□□□ -0.14
RFTN1-201ENST00000334133 DEFB125Q8N687 156 aa14.2□□□□□ -0.14
RFTN1-201ENST00000334133 BRI3O95415 125 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 BOD1L2Q8IYS8 172 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 FAM19A4Q96LR4 140 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 MRPL35Q9NZE8 188 aaKnown RBP14.19□□□□□ -0.14
RFTN1-201ENST00000334133 LINC01546A6NGU7 62 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 GATA3P23771 443 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 DSCR9P59020 149 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 DEFB136Q30KP8 78 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 HHLA3Q9XRX5 114 aa14.19□□□□□ -0.14
RFTN1-201ENST00000334133 WNK1Q9H4A3 2382 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 A0A087WWL8 130 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 HOXA3O43365 443 aaPredicted RBP14.18□□□□□ -0.14
RFTN1-201ENST00000334133 UBE2V1Q13404 147 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 C18orf65Q6ZTR6 163 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 MYOZ3Q8TDC0 251 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 SMIM2Q9BVW6 85 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 CD7P09564 240 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 ZC2HC1BQ5TFG8 222 aa14.18□□□□□ -0.14
RFTN1-201ENST00000334133 IGHV4OR15-8A0A075B7B6 117 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 A0A087WW49 117 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 IGKCP01834 107 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 DPH3P1Q9H4G8 78 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 K7EP13 123 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 AMMECR1LQ6DCA0 310 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 FAM159AQ6UWV7 190 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 OR1N2Q8NGR9 330 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 CHD6Q8TD26 2715 aa14.17□□□□□ -0.14
RFTN1-201ENST00000334133 SUMO2P61956 95 aaKnown RBP14.16□□□□□ -0.14
RFTN1-201ENST00000334133 DUX3Q96PT4 197 aa14.16□□□□□ -0.14
RFTN1-201ENST00000334133 ID1P41134 155 aa14.16□□□□□ -0.14
RFTN1-201ENST00000334133 CR1P17927 2039 aa14.16□□□□□ -0.14
RFTN1-201ENST00000334133 ITPR3Q14573 2671 aa14.16□□□□□ -0.14
RFTN1-201ENST00000334133 K7EMI3 77 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 RAB37Q96AX2 223 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 MRAP2Q96G30 205 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 TRAV8-6A0A0B4J262 113 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 K7EMT4 169 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 SPINK13Q1W4C9 94 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 FAM74A4Q5TZK3 123 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 ZNF843Q8N446 348 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 VPREB3Q9UKI3 123 aa14.15□□□□□ -0.14
RFTN1-201ENST00000334133 IGHV4-31P0DP07 118 aa14.14□□□□□ -0.15
RFTN1-201ENST00000334133 NOTCH3Q9UM47 2321 aa14.14□□□□□ -0.15
RFTN1-201ENST00000334133 DPM2O94777 84 aa14.14□□□□□ -0.15
RFTN1-201ENST00000334133 KLLNB2CW77 178 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 F5H697 171 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 OR4C5Q8NGB2 326 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 ACANP16112 2415 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 ATP5LO75964 103 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 HTN1P15515 57 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 HOXD3P31249 432 aaPredicted RBP14.13□□□□□ -0.15
RFTN1-201ENST00000334133 AP1S3Q96PC3 154 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 ZMAT4Q9H898 229 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 MDFICQ9P1T7 246 aa14.13□□□□□ -0.15
RFTN1-201ENST00000334133 Q5PR19 223 aa14.12□□□□□ -0.15
RFTN1-201ENST00000334133 ADAMTSL5Q6ZMM2 481 aa14.12□□□□□ -0.15
RFTN1-201ENST00000334133 SCGB3A1Q96QR1 104 aa14.12□□□□□ -0.15
RFTN1-201ENST00000334133 CSTL1Q9H114 145 aa14.12□□□□□ -0.15
RFTN1-201ENST00000334133 ZNF702PQ9H963 129 aa14.12□□□□□ -0.15
RFTN1-201ENST00000334133 FLNAP21333 2647 aaKnown RBP14.12□□□□□ -0.15
RFTN1-201ENST00000334133 APRG1Q8IVJ8 170 aa14.12□□□□□ -0.15
RFTN1-201ENST00000334133 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.11□□□□□ -0.15
RFTN1-201ENST00000334133 SLURP1P55000 103 aa14.11□□□□□ -0.15
RFTN1-201ENST00000334133 KHDC1LQ5JSQ8 128 aa14.11□□□□□ -0.15
RFTN1-201ENST00000334133 NIPBLQ6KC79 2804 aaeCLIP14.11□□□□□ -0.15
RFTN1-201ENST00000334133 PRSS47A8MTI9 375 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 Q6YL49 198 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 Q96MF0 132 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 PRM2P04554 102 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 GCSHP23434 173 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 SNRPD3P62318 126 aaKnown RBP14.1□□□□□ -0.15
RFTN1-201ENST00000334133 HIST2H2BCQ6DN03 193 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 MAPKAPK5-AS1Q8N8E1 139 aa14.1□□□□□ -0.15
RFTN1-201ENST00000334133 A0A0J9YX75 114 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 C2orf66Q6UXQ4 117 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 A0A087WX48 190 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 J3QLI3 93 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 LGALS1P09382 135 aaKnown RBP14.09□□□□□ -0.15
RFTN1-201ENST00000334133 LINC00315P59091 139 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 OR9G4Q8NGQ1 327 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 MTORP42345 2549 aa14.09□□□□□ -0.15
RFTN1-201ENST00000334133 K7EQG2 157 aa14.08□□□□□ -0.16
RFTN1-201ENST00000334133 EMP1P54849 157 aa14.08□□□□□ -0.16
RFTN1-201ENST00000334133 RNASE8Q8TDE3 154 aaKnown RBP14.08□□□□□ -0.16
RFTN1-201ENST00000334133 TENM4Q6N022 2769 aa14.08□□□□□ -0.16
RFTN1-201ENST00000334133 HSD52Q0P140 79 aa14.08□□□□□ -0.16
RFTN1-201ENST00000334133 Q8N1Y9 231 aa14.08□□□□□ -0.16
RFTN1-201ENST00000334133 ZNF580Q9UK33 172 aa14.08□□□□□ -0.16
RFTN1-201ENST00000334133 KNCNA6PVL3 124 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms