RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 BATFQ16520 125 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 TMEM78Q5T7P6 136 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 ZC2HC1AQ96GY0 325 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 COX11Q9Y6N1 276 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 GPX1P07203 203 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 IGLC3P0DOY3 106 aa12.05□□□□□ -0.48
SHOX-201ENST00000334060 RBAKDNA6NC62 111 aa12.04□□□□□ -0.48
SHOX-201ENST00000334060 K7EN84 100 aa12.04□□□□□ -0.48
SHOX-201ENST00000334060 SERF1AO75920 110 aa12.04□□□□□ -0.48
SHOX-201ENST00000334060 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
SHOX-201ENST00000334060 LTAP01374 205 aa12.04□□□□□ -0.48
SHOX-201ENST00000334060 SPATA45Q537H7 98 aa12.04□□□□□ -0.48
SHOX-201ENST00000334060 MRPL18Q9H0U6 180 aaKnown RBP12.04□□□□□ -0.48
SHOX-201ENST00000334060 C9JCJ5 164 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 UBE2G1P62253 170 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 SBSPONQ8IVN8 264 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 C11orf21Q9P2W6 132 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 TRAV12-3A0A0B4J271 114 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 RNASE4P34096 147 aaKnown RBP12.03□□□□□ -0.48
SHOX-201ENST00000334060 DEFB135Q30KP9 77 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 Q6ZN92 141 aa12.03□□□□□ -0.48
SHOX-201ENST00000334060 ALKBH7Q9BT30 221 aaPredicted RBP12.03□□□□□ -0.48
SHOX-201ENST00000334060 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.49
SHOX-201ENST00000334060 NUPR1O60356 82 aa12.02□□□□□ -0.49
SHOX-201ENST00000334060 C1orf158Q8N1D5 194 aa12.02□□□□□ -0.49
SHOX-201ENST00000334060 CSNK1G2-AS1Q8NCQ2 148 aa12.02□□□□□ -0.49
SHOX-201ENST00000334060 FMC1Q96HJ9 113 aa12.02□□□□□ -0.49
SHOX-201ENST00000334060 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
SHOX-201ENST00000334060 IGHV3OR16-12A0A075B7B8 117 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 KLLNB2CW77 178 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 CCL25O15444 150 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 DUSP14O95147 198 aaKnown RBP12.01□□□□□ -0.49
SHOX-201ENST00000334060 PRR27Q6MZM9 219 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 OCC1Q8TAD7 63 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 KCNS1Q96KK3 526 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 MLST8Q9BVC4 326 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 SPRY2O43597 315 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 FAM162BQ5T6X4 162 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 CSTL1Q9H114 145 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 TP53TG3Q9ULZ0 132 aa12.01□□□□□ -0.49
SHOX-201ENST00000334060 CMC4P56277 68 aaPredicted RBP12□□□□□ -0.49
SHOX-201ENST00000334060 MUC21Q5SSG8 566 aa12□□□□□ -0.49
SHOX-201ENST00000334060 RASL11AQ6T310 242 aa12□□□□□ -0.49
SHOX-201ENST00000334060 ZNF575Q86XF7 245 aa12□□□□□ -0.49
SHOX-201ENST00000334060 OR4C5Q8NGB2 326 aa12□□□□□ -0.49
SHOX-201ENST00000334060 RNASE8Q8TDE3 154 aaKnown RBP12□□□□□ -0.49
SHOX-201ENST00000334060 STPG4Q8N801 248 aa11.99□□□□□ -0.49
SHOX-201ENST00000334060 CHTOPQ9Y3Y2 248 aaKnown RBP11.99□□□□□ -0.49
SHOX-201ENST00000334060 K7EQM0 130 aa11.99□□□□□ -0.49
SHOX-201ENST00000334060 ZNF324O75467 553 aaPredicted RBP11.99□□□□□ -0.49
SHOX-201ENST00000334060 MGST1P10620 155 aaKnown RBP11.99□□□□□ -0.49
SHOX-201ENST00000334060 GNG4P50150 75 aa11.99□□□□□ -0.49
SHOX-201ENST00000334060 BORCS7Q96B45 105 aa11.99□□□□□ -0.49
SHOX-201ENST00000334060 HLA-DQA1P01909 254 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 HTN1P15515 57 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 LINC00310P59036 64 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 KRTDAPP60985 99 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 TDRG1Q3Y452 100 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 Q8N976 141 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 SERTM2A0A1B0GWG4 89 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 A8MZ25 164 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 TSPOP30536 169 aa11.98□□□□□ -0.49
SHOX-201ENST00000334060 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
SHOX-201ENST00000334060 AZU1P20160 251 aa11.97□□□□□ -0.49
SHOX-201ENST00000334060 C7orf71A4D174 169 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 GRIFINA4D1Z8 144 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 DEFB4AO15263 64 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 SH2D1AO60880 128 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 AMTP48728 403 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 SMIM12Q96EX1 92 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 CLUHP3Q96NS8 147 aa11.96□□□□□ -0.49
SHOX-201ENST00000334060 TRAV9-2A0A087WT02 112 aa11.96□□□□□ -0.5
SHOX-201ENST00000334060 TMSB15BA0A087X1C1 80 aa11.96□□□□□ -0.5
SHOX-201ENST00000334060 TRBV6-1A0A0K0K1D8 114 aa11.96□□□□□ -0.5
SHOX-201ENST00000334060 SNURFLB1AK76 121 aa11.96□□□□□ -0.5
SHOX-201ENST00000334060 LEPP41159 167 aa11.96□□□□□ -0.5
SHOX-201ENST00000334060 ODF3Q96PU9 254 aa11.96□□□□□ -0.5
SHOX-201ENST00000334060 K7ERU9 68 aa11.95□□□□□ -0.5
SHOX-201ENST00000334060 CIDEAO60543 219 aa11.95□□□□□ -0.5
SHOX-201ENST00000334060 NUDT10Q8NFP7 164 aa11.95□□□□□ -0.5
SHOX-201ENST00000334060 OSTCQ9NRP0 149 aa11.95□□□□□ -0.5
SHOX-201ENST00000334060 IGKV3D-20A0A0C4DH25 116 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 X6R8D5 127 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 TGP01266 2768 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 HSBP1L1C9JCN9 74 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 GNRH2O43555 120 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 ANXA2RQ3ZCQ2 193 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 Q6AWC8 147 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
SHOX-201ENST00000334060 INSP01308 110 aa11.93□□□□□ -0.5
SHOX-201ENST00000334060 NDFIP1Q9BT67 221 aa11.93□□□□□ -0.5
SHOX-201ENST00000334060 MORN3Q6PF18 240 aaPredicted RBP11.92□□□□□ -0.5
SHOX-201ENST00000334060 COX8CQ7Z4L0 72 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 KIR2DL5BQ8NHK3 375 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 ST20Q9HBF5 79 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 NAT8BQ9UHF3 227 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 C19orf71A6NCJ1 209 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 APOC4P55056 127 aa11.92□□□□□ -0.5
SHOX-201ENST00000334060 LINC01587Q99440 93 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms