RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 MUC4Q99102 2169 aa15.35■□□□□ 0.05
LINC01006-201ENST00000333319 ADAMTSL5Q6ZMM2 481 aa15.34■□□□□ 0.05
LINC01006-201ENST00000333319 TMEM160Q9NX00 188 aa15.34■□□□□ 0.05
LINC01006-201ENST00000333319 MRPL35Q9NZE8 188 aaKnown RBP15.34■□□□□ 0.05
LINC01006-201ENST00000333319 SAMD13Q5VXD3 122 aa15.34■□□□□ 0.05
LINC01006-201ENST00000333319 FAM159AQ6UWV7 190 aa15.34■□□□□ 0.05
LINC01006-201ENST00000333319 GTSCR1Q86UQ5 136 aa15.34■□□□□ 0.05
LINC01006-201ENST00000333319 AP1S3Q96PC3 154 aa15.34■□□□□ 0.05
LINC01006-201ENST00000333319 TMEM89A2RUT3 159 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 RNF223E7ERA6 249 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 ZNF688P0C7X2 276 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 HSD52Q0P140 79 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 PSMG4Q5JS54 123 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 ZC2HC1BQ5TFG8 222 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 C20orf78Q9BR46 151 aa15.33■□□□□ 0.05
LINC01006-201ENST00000333319 FOSL1P15407 271 aa15.33■□□□□ 0.04
LINC01006-201ENST00000333319 OR4C5Q8NGB2 326 aa15.33■□□□□ 0.04
LINC01006-201ENST00000333319 TTTY13Q9BZ97 58 aa15.33■□□□□ 0.04
LINC01006-201ENST00000333319 ORMDL2Q53FV1 153 aa15.32■□□□□ 0.04
LINC01006-201ENST00000333319 TRAV12-3A0A0B4J271 114 aa15.32■□□□□ 0.04
LINC01006-201ENST00000333319 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.32■□□□□ 0.04
LINC01006-201ENST00000333319 AMMECR1LQ6DCA0 310 aa15.32■□□□□ 0.04
LINC01006-201ENST00000333319 BBC3Q96PG8 261 aaPredicted RBP15.32■□□□□ 0.04
LINC01006-201ENST00000333319 VPREB3Q9UKI3 123 aa15.32■□□□□ 0.04
LINC01006-201ENST00000333319 MXRA5Q9NR99 2828 aa15.32■□□□□ 0.04
LINC01006-201ENST00000333319 A0A087WX48 190 aa15.31■□□□□ 0.04
LINC01006-201ENST00000333319 SYNJ2BPP57105 145 aa15.31■□□□□ 0.04
LINC01006-201ENST00000333319 NXPH4O95158 308 aa15.3■□□□□ 0.04
LINC01006-201ENST00000333319 PTPN13Q12923 2485 aa15.3■□□□□ 0.04
LINC01006-201ENST00000333319 TRAV8-6A0A0B4J262 113 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 A6NDN8 102 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 IGKV3-20P01619 116 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 CD7P09564 240 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 SNRPD3P62318 126 aaKnown RBP15.29■□□□□ 0.04
LINC01006-201ENST00000333319 Q6YL49 198 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 TOMM6Q96B49 74 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 SCGB3A1Q96QR1 104 aa15.29■□□□□ 0.04
LINC01006-201ENST00000333319 DUX5Q96PT3 197 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 JPT2Q9H910 190 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 KIF25-AS1Q9Y6Z4 181 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 IGHV4OR15-8A0A075B7B6 117 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 A0A087WW49 117 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 LGALS1P09382 135 aaKnown RBP15.28■□□□□ 0.04
LINC01006-201ENST00000333319 IGHV4-31P0DP07 118 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 LINC00315P59091 139 aa15.28■□□□□ 0.04
LINC01006-201ENST00000333319 UBR5O95071 2799 aaPredicted RBP15.27■□□□□ 0.04
LINC01006-201ENST00000333319 A0A0J9YX75 114 aa15.27■□□□□ 0.04
LINC01006-201ENST00000333319 K7EMI3 77 aa15.27■□□□□ 0.04
LINC01006-201ENST00000333319 K7EQG2 157 aa15.27■□□□□ 0.04
LINC01006-201ENST00000333319 POM121L12Q8N7R1 296 aa15.27■□□□□ 0.04
LINC01006-201ENST00000333319 ZNF702PQ9H963 129 aa15.27■□□□□ 0.04
LINC01006-201ENST00000333319 BEX4Q9NWD9 120 aaPredicted RBP15.27■□□□□ 0.04
LINC01006-201ENST00000333319 TRAV12-2A0A075B6T6 113 aa15.27■□□□□ 0.03
LINC01006-201ENST00000333319 PPP1R17O96001 155 aa15.27■□□□□ 0.03
LINC01006-201ENST00000333319 FSHBP01225 129 aa15.27■□□□□ 0.03
LINC01006-201ENST00000333319 KRTAP10-9P60411 292 aa15.27■□□□□ 0.03
LINC01006-201ENST00000333319 CSTL1Q9H114 145 aa15.27■□□□□ 0.03
LINC01006-201ENST00000333319 AGRNO00468 2067 aa15.27■□□□□ 0.03
LINC01006-201ENST00000333319 SORL1Q92673 2214 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 HOXA3O43365 443 aaPredicted RBP15.26■□□□□ 0.03
LINC01006-201ENST00000333319 ELANEP08246 267 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 ABCA12Q86UK0 2595 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 TRAV12-1A0A0B4J245 112 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 H3BRM9 83 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 PLNP26678 52 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 C2orf66Q6UXQ4 117 aa15.26■□□□□ 0.03
LINC01006-201ENST00000333319 CR1P17927 2039 aa15.25■□□□□ 0.03
LINC01006-201ENST00000333319 H7C1H1 209 aa15.25■□□□□ 0.03
LINC01006-201ENST00000333319 HOXD3P31249 432 aaPredicted RBP15.25■□□□□ 0.03
LINC01006-201ENST00000333319 NEGR1Q7Z3B1 354 aa15.25■□□□□ 0.03
LINC01006-201ENST00000333319 HIGD1BQ9P298 99 aa15.25■□□□□ 0.03
LINC01006-201ENST00000333319 A0A087WWL8 130 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 F8VRH5 84 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 ODF3Q96PU9 254 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 TRBV25-1A0A075B6N4 114 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 LGALS9O00182 355 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 UBE2E2Q96LR5 201 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 CHAC1Q9BUX1 264 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 NAV2Q8IVL1 2488 aa15.24■□□□□ 0.03
LINC01006-201ENST00000333319 TEX15Q9BXT5 2789 aa15.23■□□□□ 0.03
LINC01006-201ENST00000333319 NEXN-AS1Q8NBZ9 246 aa15.23■□□□□ 0.03
LINC01006-201ENST00000333319 CHTOPQ9Y3Y2 248 aaKnown RBP15.23■□□□□ 0.03
LINC01006-201ENST00000333319 C9orf118A6NHY6 69 aa15.23■□□□□ 0.03
LINC01006-201ENST00000333319 SUMO4Q6EEV6 95 aa15.23■□□□□ 0.03
LINC01006-201ENST00000333319 ZNF843Q8N446 348 aa15.23■□□□□ 0.03
LINC01006-201ENST00000333319 F5H697 171 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 HLA-DRB4P13762 266 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 SPINK13Q1W4C9 94 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 RAB37Q96AX2 223 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 MDFICQ9P1T7 246 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 HLA-DRB4X5D2U9 266 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 CREBBPQ92793 2442 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 IGHV3-16A0A0C4DH30 117 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 K7EP13 123 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 GCSHP23434 173 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 CDKN1BP46527 198 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 MAPKAPK5-AS1Q8N8E1 139 aa15.22■□□□□ 0.03
LINC01006-201ENST00000333319 RNASE8Q8TDE3 154 aaKnown RBP15.22■□□□□ 0.03
LINC01006-201ENST00000333319 BAALCQ8WXS3 180 aa15.21■□□□□ 0.03
LINC01006-201ENST00000333319 NAA38Q9BRA0 125 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms