RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 DEFB135Q30KP9 77 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
SYN3-201ENST00000332840 GDF5OSQ5U4N7 250 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 MORN3Q6PF18 240 aaPredicted RBP7.12□□□□□ -1.27
SYN3-201ENST00000332840 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 RNF183Q96D59 192 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 OVOL2Q9BRP0 275 aa7.12□□□□□ -1.27
SYN3-201ENST00000332840 MRPL18Q9H0U6 180 aaKnown RBP7.12□□□□□ -1.27
SYN3-201ENST00000332840 IGKV3D-20A0A0C4DH25 116 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 LOC105371267A0A1B0GV96 52 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 A8MTW9 85 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 J3KRW8 73 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 IGLC6P0CF74 106 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 HLA-DRB4P13762 266 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 RNASE4P34096 147 aaKnown RBP7.11□□□□□ -1.27
SYN3-201ENST00000332840 NUTF2P61970 127 aaKnown RBP7.11□□□□□ -1.27
SYN3-201ENST00000332840 PRR9Q5T870 116 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 LYZL1Q6UWQ5 148 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 FER1L6-AS1Q8NA97 138 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 C11orf21Q9P2W6 132 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 HLA-DRB4X5D2U9 266 aa7.11□□□□□ -1.27
SYN3-201ENST00000332840 DNAH1Q9P2D7 4330 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 AGRNO00468 2067 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 C7orf71A4D174 169 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 F2Z2F3 143 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 H3BMM0 161 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 IGKV3-20P01619 116 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 APCSP02743 223 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 ARMS2P0C7Q2 107 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 CTRLP40313 264 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 CDKN1BP46527 198 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 CAMPP49913 170 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 NDUFA6P56556 154 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 CLUHP3Q96NS8 147 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 TPPP3Q9BW30 176 aa7.1□□□□□ -1.27
SYN3-201ENST00000332840 LCE6AA0A183 80 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 C5orf52A6NGY3 159 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 SNRPEP62304 92 aaKnown RBP7.09□□□□□ -1.27
SYN3-201ENST00000332840 AMTNQ6UX39 209 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 TRPT1Q86TN4 253 aaKnown RBP7.09□□□□□ -1.27
SYN3-201ENST00000332840 ZNF575Q86XF7 245 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 GATD1Q8NB37 220 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 KCNS1Q96KK3 526 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 C1QTNF4Q9BXJ3 329 aa7.09□□□□□ -1.27
SYN3-201ENST00000332840 STARD9Q9P2P6 4700 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 ZNF124Q15973 351 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 SPINK13Q1W4C9 94 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 ANXA2RQ3ZCQ2 193 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 DNLZQ5SXM8 178 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 FAM159AQ6UWV7 190 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 CNFNQ9BYD5 112 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 C11orf68Q9H3H3 251 aaKnown RBP7.08□□□□□ -1.28
SYN3-201ENST00000332840 NAGKQ9UJ70 344 aa7.08□□□□□ -1.28
SYN3-201ENST00000332840 TRAV12-3A0A0B4J271 114 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 A0A0J9YWU9 116 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 M0R2Z0 102 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 SNAI2O43623 268 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 ZNF324O75467 553 aaPredicted RBP7.07□□□□□ -1.28
SYN3-201ENST00000332840 AMBPP02760 352 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 OR5AL1P0C617 328 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 HOXA5P20719 270 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 S100A4P26447 101 aaKnown RBP7.07□□□□□ -1.28
SYN3-201ENST00000332840 ASIPP42127 132 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 CACNG7P62955 275 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 SLAQ13239 276 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 KIAA1644Q3SXP7 199 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 COA6Q5JTJ3 125 aaKnown RBP7.07□□□□□ -1.28
SYN3-201ENST00000332840 MUC21Q5SSG8 566 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 GFI1BQ5VTD9 330 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 Q6ZQT7 251 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 ZNF493Q6ZR52 646 aa7.07□□□□□ -1.28
SYN3-201ENST00000332840 SSBP4Q9BWG4 385 aaPredicted RBP7.07□□□□□ -1.28
SYN3-201ENST00000332840 HYDINQ4G0P3 5121 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 TRAV12-2A0A075B6T6 113 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 NUPR2A6NF83 97 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 NTF3P20783 257 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 TWIST1Q15672 202 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 TDRG1Q3Y452 100 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 OR11H2Q8NH07 326 aa7.06□□□□□ -1.28
SYN3-201ENST00000332840 IGHV4-4A0A075B6R2 117 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 IGHV1OR15-1A0A075B7D0 117 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 MUC21A0A0G2JKD1 596 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 MUC21A0A140T8X8 626 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 H3BVH4 76 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 GNRH2O43555 120 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 MIFP14174 115 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 SRIP30626 198 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 FXYD7P58549 80 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 Q0VG73 95 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 OR10J3Q5JRS4 329 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 SPANXN1Q5VSR9 72 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 SMIM15Q7Z3B0 74 aa7.05□□□□□ -1.28
SYN3-201ENST00000332840 C20orf144Q9BQM9 153 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms