RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 FBLL1A6NHQ2 334 aaKnown RBP12.35□□□□□ -0.43
RAB28-202ENST00000330852 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
RAB28-202ENST00000330852 SNAPINO95295 136 aa12.35□□□□□ -0.43
RAB28-202ENST00000330852 RAB5CP51148 216 aa12.35□□□□□ -0.43
RAB28-202ENST00000330852 HSD17B11Q8NBQ5 300 aa12.35□□□□□ -0.43
RAB28-202ENST00000330852 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
RAB28-202ENST00000330852 PGPEP1Q9NXJ5 209 aa12.35□□□□□ -0.43
RAB28-202ENST00000330852 TYMSP04818 313 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 TMEM167BQ9NRX6 74 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 LRP1BQ9NZR2 4599 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 TCRAP04437 139 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 EVI2AP22794 236 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 ATP6V0CP27449 155 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 GCHFRP30047 84 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 GNG5P63218 68 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
RAB28-202ENST00000330852 F6UZH7 168 aa12.33□□□□□ -0.44
RAB28-202ENST00000330852 CXorf1O96002 111 aa12.33□□□□□ -0.44
RAB28-202ENST00000330852 TIRAPP58753 221 aa12.33□□□□□ -0.44
RAB28-202ENST00000330852 ERVFC1-1P60608 527 aa12.33□□□□□ -0.44
RAB28-202ENST00000330852 ACTR3CQ9C0K3 210 aaPredicted RBP12.33□□□□□ -0.44
RAB28-202ENST00000330852 HSPG2P98160 4391 aa12.33□□□□□ -0.44
RAB28-202ENST00000330852 DNAH10OSP0CZ25 163 aa12.32□□□□□ -0.44
RAB28-202ENST00000330852 CDPF1Q6NVV7 123 aa12.32□□□□□ -0.44
RAB28-202ENST00000330852 CBLN2Q8IUK8 224 aa12.32□□□□□ -0.44
RAB28-202ENST00000330852 KRTAP4-5Q9BYR2 181 aa12.32□□□□□ -0.44
RAB28-202ENST00000330852 FHITP49789 147 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 C10orf126Q8N4M7 172 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 PTH2Q96A98 100 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 EPDR1Q9UM22 224 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 PSG8Q9UQ74 426 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 GATA1P15976 413 aaPredicted RBP12.31□□□□□ -0.44
RAB28-202ENST00000330852 SUMO1P63165 101 aaKnown RBP12.31□□□□□ -0.44
RAB28-202ENST00000330852 SAPCD1Q5SSQ6 148 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 Q8N1X5 172 aa12.31□□□□□ -0.44
RAB28-202ENST00000330852 PFN1P07737 140 aaKnown RBP12.3□□□□□ -0.44
RAB28-202ENST00000330852 FLI1Q01543 452 aaPredicted RBP12.3□□□□□ -0.44
RAB28-202ENST00000330852 ZNF876PQ49A33 203 aa12.3□□□□□ -0.44
RAB28-202ENST00000330852 CYB561D1Q8N8Q1 229 aa12.3□□□□□ -0.44
RAB28-202ENST00000330852 TMEM75Q8N9X5 138 aa12.3□□□□□ -0.44
RAB28-202ENST00000330852 MSRB1Q9NZV6 116 aa12.3□□□□□ -0.44
RAB28-202ENST00000330852 A0A1W2PRE2 83 aa12.29□□□□□ -0.44
RAB28-202ENST00000330852 GCGP01275 180 aa12.29□□□□□ -0.44
RAB28-202ENST00000330852 WFDC10BQ8IUB3 73 aa12.29□□□□□ -0.44
RAB28-202ENST00000330852 SGK494Q96LW2 274 aa12.29□□□□□ -0.44
RAB28-202ENST00000330852 IGLV2-11P01706 119 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 PEA15Q15121 130 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 TRBV6-4A0A1B0GX49 114 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 GGTLC3B5MD39 225 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 UMAD1C9J7I0 102 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 RS1O15537 224 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 ZNF80P51504 273 aaPredicted RBP12.28□□□□□ -0.44
RAB28-202ENST00000330852 NHLRC2Q8NBF2 726 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 C9orf85Q96MD7 179 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 PRADC1Q9BSG0 188 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
RAB28-202ENST00000330852 C11orf21Q9P2W6 132 aa12.27□□□□□ -0.45
RAB28-202ENST00000330852 PPT1P50897 306 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 RHOHQ15669 191 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 PIK3CD-AS1Q5SR53 167 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 CFAP126Q5VTH2 177 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 PRNTQ86SH4 94 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 FAM213BQ8TBF2 198 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 ABCA13Q86UQ4 5058 aa12.26□□□□□ -0.45
RAB28-202ENST00000330852 A0A087WTM6 91 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 CRYGDP07320 174 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 SLC25A29Q8N8R3 303 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 SMDT1Q9H4I9 107 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 SCRT2Q9NQ03 307 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 LOC100131303A0A0U1RQF7 123 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 CTXND1A0A1B0GTU2 59 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 COLCA2A8K830 154 aa12.25□□□□□ -0.45
RAB28-202ENST00000330852 TRAV8-6A0A0B4J262 113 aa12.24□□□□□ -0.45
RAB28-202ENST00000330852 MGST1P10620 155 aaKnown RBP12.24□□□□□ -0.45
RAB28-202ENST00000330852 LINC01556Q5JQF7 62 aa12.24□□□□□ -0.45
RAB28-202ENST00000330852 DPPA3Q6W0C5 159 aa12.24□□□□□ -0.45
RAB28-202ENST00000330852 SMCO4Q9NRQ5 59 aa12.24□□□□□ -0.45
RAB28-202ENST00000330852 DNAH5Q8TE73 4624 aa12.24□□□□□ -0.45
RAB28-202ENST00000330852 RNASE3P12724 160 aaKnown RBP12.23□□□□□ -0.45
RAB28-202ENST00000330852 CCL20P78556 96 aa12.23□□□□□ -0.45
RAB28-202ENST00000330852 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
RAB28-202ENST00000330852 APOBP04114 4563 aaKnown RBP12.23□□□□□ -0.45
RAB28-202ENST00000330852 FABP5P3A8MUU1 101 aa12.23□□□□□ -0.45
RAB28-202ENST00000330852 ZNF506Q5JVG8 444 aa12.23□□□□□ -0.45
RAB28-202ENST00000330852 HIST1H2BAQ96A08 127 aa12.23□□□□□ -0.45
RAB28-202ENST00000330852 PGPEP1LA6NFU8 196 aa12.22□□□□□ -0.45
RAB28-202ENST00000330852 ZFP2Q6ZN57 461 aa12.22□□□□□ -0.45
RAB28-202ENST00000330852 C15orf54Q8N8G6 183 aa12.22□□□□□ -0.45
RAB28-202ENST00000330852 TRAV1-1A0A0B4J248 108 aa12.21□□□□□ -0.45
RAB28-202ENST00000330852 A8MWV9 139 aa12.21□□□□□ -0.45
RAB28-202ENST00000330852 ZNF726P1Q15940 193 aa12.21□□□□□ -0.45
RAB28-202ENST00000330852 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
RAB28-202ENST00000330852 LELP1Q5T871 98 aa12.21□□□□□ -0.45
RAB28-202ENST00000330852 ARL2-SNX15V9GYD0 113 aa12.21□□□□□ -0.45
RAB28-202ENST00000330852 C7orf77A4D0Y5 90 aa12.2□□□□□ -0.46
RAB28-202ENST00000330852 RBFOX3A6NFN3 312 aa12.2□□□□□ -0.46
RAB28-202ENST00000330852 IBA57-AS1B1ANH7 110 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms