RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 DEFB125Q8N687 156 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 RASL10AQ92737 203 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 SFRP2Q96HF1 295 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 DNAJC30Q96LL9 226 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TLN2Q9Y4G6 2542 aa2.38□□□□□ -2.03
SCAMP1-201ENST00000320280 TRAV34A0A0B4J273 112 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3-16A0A0C4DH30 117 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 SMIM27A0A1W2PRY6 76 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 KNCNA6PVL3 124 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 RPL23P62829 140 aaKnown RBP2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 C15orf53Q8NAA6 179 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 Q8NAQ8 132 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 OR10G8Q8NGN5 311 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 ZC2HC1AQ96GY0 325 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 SGK494Q96LW2 274 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 NAT8BQ9UHF3 227 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 TIMM8BQ9Y5J9 83 aaPredicted RBP2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3OR16-13A0A075B7E8 117 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3OR16-8A0A075B7F1 116 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 IGHV3-74A0A0B4J1X5 117 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 TRBV10-1A0A0K0K1A3 114 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 CBY3A6NI87 242 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 PRAC2D3DTV9 90 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 H7C1H1 209 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 ORM1P02763 201 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 SPART-AS1P0CW21 52 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 S100PP25815 95 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 SMAGPQ0VAQ4 97 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 RIGQ13278 110 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 SMIM15Q7Z3B0 74 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 C1orf158Q8N1D5 194 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 C11orf72Q8NBR9 251 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 CELSR1Q9NYQ6 3014 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 MTORP42345 2549 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 FRAS1Q86XX4 4008 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 NUPR2A6NF83 97 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 F8W036 122 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 C3orf84H3BNL1 204 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 ZNF561-AS1K7EIQ3 104 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 RS1O15537 224 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 TYMSP04818 313 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 NPSP0C0P6 89 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 GNG5P63218 68 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 U3KQK5 164 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 SVEP1Q4LDE5 3571 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 DNAH6Q9C0G6 4158 aa2.37□□□□□ -2.03
SCAMP1-201ENST00000320280 PPBPP02775 128 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 RAB4BP61018 213 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 KRTAP15-1Q3LI76 137 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 GDF5OSQ5U4N7 250 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 OCC1Q8TAD7 63 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 MRAP2Q96G30 205 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 AP1S3Q96PC3 154 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 LINC01587Q99440 93 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 RARRES2Q99969 163 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 TRAV10A0A0B4J240 114 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 NCR2O95944 276 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 G0S2P27469 103 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 HLA-DMBP28068 263 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 ERCC8Q13216 396 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 SPINK13Q1W4C9 94 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 FER1L6-AS1Q8NA97 138 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 TMEM208Q9BTX3 173 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 V9GYV3 84 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 TRRAPQ9Y4A5 3859 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 TRBV24-1A0A075B6N3 115 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 TRBV6-4A0A1B0GX49 114 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 PRSS47A8MTI9 375 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 RNASE4P34096 147 aaKnown RBP2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 ERVFC1-1P60608 527 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 CLRN3Q8NCR9 226 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 OR11H2Q8NH07 326 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 DKK2Q9UBU2 259 aa2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 MAP1AP78559 2803 aaPredicted RBP2.36□□□□□ -2.03
SCAMP1-201ENST00000320280 TRBV20OR9-2A0A075B6H5 130 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 PLAC8L1A1L4L8 177 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 H7C423 109 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 K7EN84 100 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 BTN1A1Q13410 526 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 CHCHD7Q9BUK0 85 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 KRTAP9-8Q9BYQ0 159 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 TMEM191AQ9H0A3 160 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 NAGKQ9UJ70 344 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 KLK5Q9Y337 293 aaPredicted RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 KMT2CQ8NEZ4 4911 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 IGKV3D-20A0A0C4DH25 116 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 TRBV6-5A0A0K0K1A5 114 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 A0A1B0GUT8 65 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 ZNF705GA8MUZ8 300 aaPredicted RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 HLA-DQA1P01909 254 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 ATP5G1P05496 136 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 RPL35AP18077 110 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 S100A4P26447 101 aaKnown RBP2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 OR5I1Q13606 314 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 ADIRFQ15847 76 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 OR2D3Q8NGH3 330 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 GNB1LQ9BYB4 327 aa2.35□□□□□ -2.03
SCAMP1-201ENST00000320280 DPH3P1Q9H4G8 78 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms