RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 RPL7P18124 248 aaKnown RBP7.28□□□□□ -1.24
CAPN3-201ENST00000318023 CD69Q07108 199 aa7.28□□□□□ -1.24
CAPN3-201ENST00000318023 IGHV4-38-2P0DP08 117 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 FAM104BQ5XKR9 115 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 PIFOQ8TCI5 191 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 MRPL36Q9P0J6 103 aaKnown RBP7.27□□□□□ -1.25
CAPN3-201ENST00000318023 MYMXA0A1B0GTQ4 84 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 SMIM9A6NGZ8 99 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 FSTL3O95633 263 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 TWIST1Q15672 202 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 TAL2Q16559 108 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 LYZL1Q6UWQ5 148 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 Q8IYB0 196 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 ZNF714Q96N38 554 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 MDFIQ99750 246 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 VCX2Q9H322 139 aa7.27□□□□□ -1.25
CAPN3-201ENST00000318023 NCBP2LA6PVI3 153 aaKnown RBP7.26□□□□□ -1.25
CAPN3-201ENST00000318023 RNASE2P10153 161 aaKnown RBP7.26□□□□□ -1.25
CAPN3-201ENST00000318023 C21orf62Q9NYP8 219 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 CRIP2P52943 208 aaPredicted RBP7.26□□□□□ -1.25
CAPN3-201ENST00000318023 C15orf53Q8NAA6 179 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 OR1L4Q8NGR5 311 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 MGAM2Q2M2H8 2515 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 TRAV25A0A0B4J276 109 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 C15orf65H3BRN8 121 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 COX7A1P24310 79 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 LINC01587Q99440 93 aa7.26□□□□□ -1.25
CAPN3-201ENST00000318023 NDUFB3O43676 98 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 IGKV1-16P04430 117 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 SCGB1C2P0DMR2 95 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 PRCDQ00LT1 54 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 TMEM155Q4W5P6 130 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 ZNF493Q6ZR52 646 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 DNHD1Q96M86 4753 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 IGKV1D-17A0A075B6S4 117 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 IGHV3-21A0A0B4J1V1 117 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 OOSP1A8MZH6 123 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 C9JAW5 83 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 IGLV2-11P01706 119 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 CCL3L1P16619 93 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 AAMDCQ9H7C9 122 aa7.25□□□□□ -1.25
CAPN3-201ENST00000318023 KLK5Q9Y337 293 aaPredicted RBP7.25□□□□□ -1.25
CAPN3-201ENST00000318023 GATA1P15976 413 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-201ENST00000318023 UBE2D3P61077 147 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 UBE2D2P62837 147 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 CD177Q8N6Q3 437 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 TRGV9Q99603 122 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 U3KQK5 164 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 IGKV1D-37A0A075B6S9 117 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 SRRM5B3KS81 715 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 E7EUB6 86 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 SLC25A20O43772 301 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 SAA2P0DJI9 122 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-201ENST00000318023 PRDX2P32119 198 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 GATA4P43694 442 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 MZT1Q08AG7 82 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 C2orf83Q53S99 150 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 OR10J6PQ8NGY7 276 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 NTN5Q8WTR8 489 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-201ENST00000318023 MDFICQ9P1T7 246 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 CRIP1P50238 77 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 HIST2H2BDQ6DRA6 164 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 FAM19A5Q7Z5A7 132 aaPredicted RBP7.24□□□□□ -1.25
CAPN3-201ENST00000318023 TRPT1Q86TN4 253 aaKnown RBP7.24□□□□□ -1.25
CAPN3-201ENST00000318023 OR11H6Q8NGC7 330 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 ODF3Q96PU9 254 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 ZNRD1Q9P1U0 126 aa7.24□□□□□ -1.25
CAPN3-201ENST00000318023 C8orf49Q96NF6 230 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 TMEM126AQ9H061 195 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 TEX49A0A1B0GTD5 131 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 LGALS1P09382 135 aaKnown RBP7.23□□□□□ -1.25
CAPN3-201ENST00000318023 ASIPP42127 132 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 C10orf55Q5SWW7 151 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 SCGB1D4Q6XE38 83 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 EDA2RQ9HAV5 297 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 MSRB1Q9NZV6 116 aa7.23□□□□□ -1.25
CAPN3-201ENST00000318023 GP9P14770 177 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 TMEM78Q5T7P6 136 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 GATD1Q8NB37 220 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 PLEKHB2Q96CS7 222 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 GAFA1Q96PS6 74 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 LHBP01229 141 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 H7C2G1 150 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 APELAP0DMC3 54 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 Q8N1Y9 231 aa7.22□□□□□ -1.25
CAPN3-201ENST00000318023 RPUSD1Q9UJJ7 312 aaKnown RBP7.22□□□□□ -1.25
CAPN3-201ENST00000318023 UPK2O00526 184 aa7.21□□□□□ -1.25
CAPN3-201ENST00000318023 SBSPONQ8IVN8 264 aa7.21□□□□□ -1.25
CAPN3-201ENST00000318023 TRAV8-4A0A0B4J246 113 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 ATP5LO75964 103 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 SAA1P0DJI8 122 aaPredicted RBP7.21□□□□□ -1.26
CAPN3-201ENST00000318023 UBE2D1P51668 147 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 EMP1P54849 157 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 PSMG4Q5JS54 123 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 Q6Q795 121 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 VMO1Q7Z5L0 202 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 C17orf77Q96MU5 243 aa7.21□□□□□ -1.26
CAPN3-201ENST00000318023 TRAV2A0A0B4J234 112 aa7.2□□□□□ -1.26
CAPN3-201ENST00000318023 ZNF815PA8K554 130 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms