RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
COL3A1-202ENST00000317840 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
COL3A1-202ENST00000317840 H7C1H1 209 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 APOMO95445 188 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 IGHV4-38-2P0DP08 117 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 SMAGPQ0VAQ4 97 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 C1orf122Q6ZSJ8 110 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 ZFAND3Q9H8U3 227 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 HECTD1Q9ULT8 2610 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 HHLA3Q9XRX5 114 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 A0A087WX48 190 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 ZNF815PA8K554 130 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 C9orf139Q6ZV77 190 aa8.06□□□□□ -1.12
COL3A1-202ENST00000317840 RPL39LQ96EH5 51 aaKnown RBP8.06□□□□□ -1.12
COL3A1-202ENST00000317840 A0A1B0GWB2 263 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 RBAKDNA6NC62 111 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 F8VRH5 84 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 C2orf66Q6UXQ4 117 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 DPH3P1Q9H4G8 78 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 CENPVL3A0A0U1RRI6 287 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 MSMBP08118 114 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 ANXA2RQ3ZCQ2 193 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 TMEM170BQ5T4T1 132 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 Q8N6K4 173 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 MAPKAPK5-AS1Q8N8E1 139 aa8.05□□□□□ -1.12
COL3A1-202ENST00000317840 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 B4DSR2 109 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 G3V4G9 280 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 C12orf74Q32Q52 190 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 SAMD13Q5VXD3 122 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 SIRPDQ9H106 197 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 GNRH2O43555 120 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 WFDC2Q14508 124 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 TMEM95Q3KNT9 176 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 LINC00477Q96M19 166 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 HIGD1BQ9P298 99 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 MOB4Q9Y3A3 225 aa8.04□□□□□ -1.12
COL3A1-202ENST00000317840 TRAV8-2A0A0B4J237 113 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 HERVK_113P61574 105 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 EBI3Q14213 229 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 GAGE13Q4V321 117 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 UNQ9165/PRO28630Q6UXU0 137 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 SH2D6Q7Z4S9 175 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 ZNF418Q8TF45 676 aaPredicted RBP8.03□□□□□ -1.12
COL3A1-202ENST00000317840 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 BEX4Q9NWD9 120 aaPredicted RBP8.03□□□□□ -1.12
COL3A1-202ENST00000317840 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
COL3A1-202ENST00000317840 A0A087WWL8 130 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 IGHV1-69DA0A0B4J2H0 117 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 TMEM238LA0A1B0GVL6 79 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 A6NJY4 79 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 HOXA3O43365 443 aaPredicted RBP8.03□□□□□ -1.12
COL3A1-202ENST00000317840 TRBV12-3P01733 135 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 LMO4P61968 165 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 BLCAPP62952 87 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 COX8CQ7Z4L0 72 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 KIR2DL4Q99706 377 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 NACAE9PAV3 2078 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 CLPSL1A2RUU4 121 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 IGLL5B9A064 214 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 CD7P09564 240 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 C11orf71Q6IPW1 123 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 SPOCK3Q9BQ16 436 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 PRADC1Q9BSG0 188 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 PGPEP1Q9NXJ5 209 aa8.03□□□□□ -1.12
COL3A1-202ENST00000317840 SRSF2Q01130 221 aaKnown RBP8.03□□□□□ -1.12
COL3A1-202ENST00000317840 IGSF10Q6WRI0 2623 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 IGHV7-4-1A0A0J9YVY3 117 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 A0A1W2PRX2 142 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 OVOL1O14753 267 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 C9orf47Q6ZRZ4 202 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 MYMXA0A1B0GTQ4 84 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 TMEM238C9JI98 176 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 H7C2G1 150 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 HLA-DRB4P13762 266 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 SLC25A16P16260 332 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 PRR9Q5T870 116 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 NRACQ8N912 160 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 RHPN1-AS1Q9BWJ2 59 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 TSSC4Q9Y5U2 329 aaPredicted RBP8.02□□□□□ -1.13
COL3A1-202ENST00000317840 HLA-DRB4X5D2U9 266 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 CFAP46Q8IYW2 2715 aa8.02□□□□□ -1.13
COL3A1-202ENST00000317840 PRSS29PA6NIE9 313 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 PSMB2P49721 201 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 ZNF56Q15929 161 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 SIGMAR1Q99720 223 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 TRAV12-3A0A0B4J271 114 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 C5orf56Q8N8D9 126 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 KLHL30-AS1Q8NEE0 82 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 FOXI2Q6ZQN5 318 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 C20orf173Q96LM9 149 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 Q96MF0 132 aa8.01□□□□□ -1.13
COL3A1-202ENST00000317840 BBC3Q96PG8 261 aaPredicted RBP8.01□□□□□ -1.13
COL3A1-202ENST00000317840 Q5PR19 223 aa8□□□□□ -1.13
COL3A1-202ENST00000317840 USP24Q9UPU5 2620 aa8□□□□□ -1.13
COL3A1-202ENST00000317840 FAM223BA6NKX1 122 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms