RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 UFC1Q9Y3C8 167 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 JMJD1CQ15652 2540 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 NUDT3O95989 172 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 ELANEP08246 267 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 EVI2AP22794 236 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 MPV17L2Q567V2 206 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 MYOZ3Q8TDC0 251 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 PEF1Q9UBV8 284 aaKnown RBP10.7□□□□□ -0.7
VRK3-201ENST00000316763 COX11Q9Y6N1 276 aa10.7□□□□□ -0.7
VRK3-201ENST00000316763 SETD2Q9BYW2 2564 aaPredicted RBP10.69□□□□□ -0.7
VRK3-201ENST00000316763 TRBV7-9A0A0J9YWB2 115 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 PRSS47A8MTI9 375 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 H3BVH4 76 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 K7EMT4 169 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 NPSP0C0P6 89 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 PSMG4Q5JS54 123 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 SAMD13Q5VXD3 122 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 Q6ZSV7 163 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 ZFAND2AQ8N6M9 145 aa10.69□□□□□ -0.7
VRK3-201ENST00000316763 PRR9Q5T870 116 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 MRAP2Q96G30 205 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 SMPXQ9UHP9 88 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 J3KRW8 73 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 GATA1P15976 413 aaPredicted RBP10.68□□□□□ -0.7
VRK3-201ENST00000316763 S100A4P26447 101 aaKnown RBP10.68□□□□□ -0.7
VRK3-201ENST00000316763 ID1P41134 155 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 ASIPP42127 132 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 TM4SF20Q53R12 229 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 BVES-AS1Q5T3Y7 98 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 DEFB125Q8N687 156 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
VRK3-201ENST00000316763 MED14OSP0DP75 135 aa10.67□□□□□ -0.7
VRK3-201ENST00000316763 PRIMA1Q86XR5 153 aa10.67□□□□□ -0.7
VRK3-201ENST00000316763 Q6ZQT7 251 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 C18orf15Q96N68 181 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 IGLV2-18A0A075B6J9 118 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 ATP5LO75964 103 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 PRSS1P07477 247 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 RNASE4P34096 147 aaKnown RBP10.66□□□□□ -0.7
VRK3-201ENST00000316763 LAGE3Q14657 143 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 NRACQ8N912 160 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 TMEM158Q8WZ71 300 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 FAM19A4Q96LR4 140 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 C2CD3Q4AC94 2353 aa10.66□□□□□ -0.7
VRK3-201ENST00000316763 IGKV3-7A0A075B6H7 116 aa10.65□□□□□ -0.7
VRK3-201ENST00000316763 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
VRK3-201ENST00000316763 APRG1Q8IVJ8 170 aa10.65□□□□□ -0.7
VRK3-201ENST00000316763 UBE2E2Q96LR5 201 aa10.65□□□□□ -0.7
VRK3-201ENST00000316763 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
VRK3-201ENST00000316763 PHLDA3Q9Y5J5 127 aa10.65□□□□□ -0.7
VRK3-201ENST00000316763 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 OR9G4Q8NGQ1 327 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 C2orf91Q6ZV80 131 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 DPH3P1Q9H4G8 78 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 DKK2Q9UBU2 259 aa10.64□□□□□ -0.71
VRK3-201ENST00000316763 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
VRK3-201ENST00000316763 F6UB75 175 aa10.63□□□□□ -0.71
VRK3-201ENST00000316763 M0R381 172 aa10.63□□□□□ -0.71
VRK3-201ENST00000316763 SIVA1O15304 175 aa10.63□□□□□ -0.71
VRK3-201ENST00000316763 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
VRK3-201ENST00000316763 FGF6P10767 208 aa10.63□□□□□ -0.71
VRK3-201ENST00000316763 LGALS1P09382 135 aaKnown RBP10.62□□□□□ -0.71
VRK3-201ENST00000316763 DEFB1P60022 68 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 UBE2V1Q13404 147 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 ODF1Q14990 250 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 TCTEX1D4Q5JR98 221 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 ZMAT4Q9H898 229 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 NDUFA7O95182 113 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 SEC11AP67812 179 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.62□□□□□ -0.71
VRK3-201ENST00000316763 LINC01006Q8NI28 216 aa10.62□□□□□ -0.71
VRK3-201ENST00000316763 TAX1BP3O14907 124 aa10.61□□□□□ -0.71
VRK3-201ENST00000316763 PPP1R17O96001 155 aa10.61□□□□□ -0.71
VRK3-201ENST00000316763 IGKCP01834 107 aa10.61□□□□□ -0.71
VRK3-201ENST00000316763 Q6ZVH6 145 aa10.61□□□□□ -0.71
VRK3-201ENST00000316763 C20orf78Q9BR46 151 aa10.61□□□□□ -0.71
VRK3-201ENST00000316763 SMIM2Q9BVW6 85 aa10.61□□□□□ -0.71
VRK3-201ENST00000316763 K7EMI3 77 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 DPM2O94777 84 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 NMUP48645 174 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 ORMDL2Q53FV1 153 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 AP1S3Q96PC3 154 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 KLLNB2CW77 178 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 VAMP3Q15836 100 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 KRTAP24-1Q3LI83 254 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 FAM159AQ6UWV7 190 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 DCANP1Q8TF63 244 aa10.6□□□□□ -0.71
VRK3-201ENST00000316763 GNRH2O43555 120 aa10.59□□□□□ -0.71
VRK3-201ENST00000316763 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
VRK3-201ENST00000316763 HSD52Q0P140 79 aa10.59□□□□□ -0.71
VRK3-201ENST00000316763 C14orf178Q8N769 122 aaPredicted RBP10.59□□□□□ -0.71
VRK3-201ENST00000316763 WFDC12Q8WWY7 111 aa10.59□□□□□ -0.71
VRK3-201ENST00000316763 CCL25O15444 150 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 MGPP08493 103 aa10.58□□□□□ -0.72
VRK3-201ENST00000316763 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms