RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 NRACQ8N912 160 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
SCAMP4-201ENST00000316097 TRBV7-3A0A075B6L6 115 aa13.11□□□□□ -0.31
SCAMP4-201ENST00000316097 DSCR9P59020 149 aa13.11□□□□□ -0.31
SCAMP4-201ENST00000316097 CCDC168Q8NDH2 2452 aa13.1□□□□□ -0.31
SCAMP4-201ENST00000316097 A0A1B0GWB2 263 aa13.1□□□□□ -0.31
SCAMP4-201ENST00000316097 SLC25A16P16260 332 aa13.1□□□□□ -0.31
SCAMP4-201ENST00000316097 PLNP26678 52 aa13.1□□□□□ -0.31
SCAMP4-201ENST00000316097 PRRC2AP48634 2157 aaKnown RBP13.1□□□□□ -0.31
SCAMP4-201ENST00000316097 DEFB113Q30KQ7 82 aa13.1□□□□□ -0.31
SCAMP4-201ENST00000316097 H3BUX3 64 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 Q5PR19 223 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 C5orf56Q8N8D9 126 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 CYSLTR1Q9Y271 337 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 IGHV3-66A0A0C4DH42 116 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 OR11H12B2RN74 326 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 RAB9AP51151 201 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 OR11H1Q8NG94 326 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 OR11H2Q8NH07 326 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 KLK15Q9H2R5 256 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 MXRA5Q9NR99 2828 aa13.09□□□□□ -0.31
SCAMP4-201ENST00000316097 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
SCAMP4-201ENST00000316097 F8VRH5 84 aa13.08□□□□□ -0.32
SCAMP4-201ENST00000316097 J3QKU1 62 aa13.08□□□□□ -0.32
SCAMP4-201ENST00000316097 CKS1BP61024 79 aa13.08□□□□□ -0.32
SCAMP4-201ENST00000316097 Q6ZS46 218 aa13.08□□□□□ -0.32
SCAMP4-201ENST00000316097 LINC01356Q8N9X3 169 aa13.08□□□□□ -0.32
SCAMP4-201ENST00000316097 SCGB2A1O75556 95 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 APOMO95445 188 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 C20orf78Q9BR46 151 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 IGHV3OR16-13A0A075B7E8 117 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 IGHV3-74A0A0B4J1X5 117 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 IGHV7-4-1A0A0J9YVY3 117 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 H7C1H1 209 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 SPANXN1Q5VSR9 72 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 MORN3Q6PF18 240 aaPredicted RBP13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 Q96MF0 132 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 AGPAT4-IT1Q9H0P7 198 aa13.07□□□□□ -0.32
SCAMP4-201ENST00000316097 Q6ZQT7 251 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 PGPEP1Q9NXJ5 209 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 PRSS47A8MTI9 375 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 HOXA3O43365 443 aaPredicted RBP13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 BLCAPP62952 87 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 TLN2Q9Y4G6 2542 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 GCN1Q92616 2671 aaKnown RBP13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.06□□□□□ -0.32
SCAMP4-201ENST00000316097 RBAKDNA6NC62 111 aa13.05□□□□□ -0.32
SCAMP4-201ENST00000316097 MRPL16Q9NX20 251 aaKnown RBP13.05□□□□□ -0.32
SCAMP4-201ENST00000316097 SCGB2A2Q13296 93 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 C15orf32Q32M92 178 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 SFTA2Q6UW10 78 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 SCGB3A1Q96QR1 104 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 SMIM2Q9BVW6 85 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 MOB4Q9Y3A3 225 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 CREBBPQ92793 2442 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 TRAV12-1A0A0B4J245 112 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 BUB3O43684 328 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 LGALS1P09382 135 aaKnown RBP13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 TMEM78Q5T7P6 136 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 WFDC12Q8WWY7 111 aa13.04□□□□□ -0.32
SCAMP4-201ENST00000316097 LINC01619G3V211 115 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 H3BVH4 76 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 IGHV4-31P0DP07 118 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 FOXI1Q12951 378 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 DEFB112Q30KQ8 113 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 SYT8Q8NBV8 401 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 IGHV3-49A0A0A0MS15 119 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 TCTEX1D4Q5JR98 221 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 KRTAP1-3Q8IUG1 177 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 SLC50A1Q9BRV3 221 aa13.03□□□□□ -0.32
SCAMP4-201ENST00000316097 ITPR3Q14573 2671 aa13.02□□□□□ -0.32
SCAMP4-201ENST00000316097 WFDC11Q8NEX6 87 aa13.02□□□□□ -0.32
SCAMP4-201ENST00000316097 C1QTNF4Q9BXJ3 329 aa13.02□□□□□ -0.32
SCAMP4-201ENST00000316097 IGHV4-59P01825 116 aa13.02□□□□□ -0.33
SCAMP4-201ENST00000316097 SMCPP49901 116 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-201ENST00000316097 ZFAND3Q9H8U3 227 aa13.02□□□□□ -0.33
SCAMP4-201ENST00000316097 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-201ENST00000316097 LINC01549A6NIU2 74 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 CFAP126Q5VTH2 177 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 FAM110DQ8TAY7 271 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 DLX4Q92988 240 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 MRAP2Q96G30 205 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 PRADC1Q9BSG0 188 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 SPRY2O43597 315 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 CLEC3BP05452 202 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 CR1P17927 2039 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 PDZD2O15018 2839 aa13.01□□□□□ -0.33
SCAMP4-201ENST00000316097 LOC107984156A0A0G2JMH3 177 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 A6NDX4 124 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 SCGB1D4Q6XE38 83 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 ARL17AQ8IVW1 177 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 NEXN-AS1Q8NBZ9 246 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 TRAV8-2A0A0B4J237 113 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 ZNF815PA8K554 130 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 PSMB2P49721 201 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 ORMDL2Q53FV1 153 aa13□□□□□ -0.33
SCAMP4-201ENST00000316097 NFE4Q86UQ8 179 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 259.6 ms