RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
MKS1-201ENST00000313863 J3KRW8 73 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 NXPH4O95158 308 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 RNASE4P34096 147 aaKnown RBP10.48□□□□□ -0.73
MKS1-201ENST00000313863 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
MKS1-201ENST00000313863 TMEM141Q96I45 108 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 GTSF1LQ9H1H1 148 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 PGPEP1Q9NXJ5 209 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 PRO0461Q9UI25 63 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 LMO4P61968 165 aa10.48□□□□□ -0.73
MKS1-201ENST00000313863 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
MKS1-201ENST00000313863 PTPRZ1P23471 2315 aaPredicted RBP10.48□□□□□ -0.73
MKS1-201ENST00000313863 SPTA1P02549 2419 aa10.47□□□□□ -0.73
MKS1-201ENST00000313863 IGHV4OR15-8A0A075B7B6 117 aa10.47□□□□□ -0.73
MKS1-201ENST00000313863 A0A087WW49 117 aa10.47□□□□□ -0.73
MKS1-201ENST00000313863 IGF1P05019 195 aa10.47□□□□□ -0.73
MKS1-201ENST00000313863 MORN3Q6PF18 240 aaPredicted RBP10.47□□□□□ -0.73
MKS1-201ENST00000313863 GPHB5Q86YW7 130 aa10.47□□□□□ -0.73
MKS1-201ENST00000313863 DCHS2Q6V1P9 2916 aa10.47□□□□□ -0.73
MKS1-201ENST00000313863 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
MKS1-201ENST00000313863 UBE2D1P51668 147 aa10.46□□□□□ -0.73
MKS1-201ENST00000313863 AMTNQ6UX39 209 aa10.46□□□□□ -0.73
MKS1-201ENST00000313863 SH2D6Q7Z4S9 175 aa10.46□□□□□ -0.73
MKS1-201ENST00000313863 APOMO95445 188 aa10.46□□□□□ -0.74
MKS1-201ENST00000313863 COX6B1P14854 86 aa10.46□□□□□ -0.74
MKS1-201ENST00000313863 PMVKQ15126 192 aa10.46□□□□□ -0.74
MKS1-201ENST00000313863 UBTD1Q9HAC8 227 aa10.46□□□□□ -0.74
MKS1-201ENST00000313863 VCYO14598 125 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 RPL11P62913 178 aaKnown RBP10.45□□□□□ -0.74
MKS1-201ENST00000313863 SMAGPQ0VAQ4 97 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 TMEM219Q86XT9 240 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 KIR2DL4Q99706 377 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 SPTBN2O15020 2390 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 HRNRQ86YZ3 2850 aaPredicted RBP10.45□□□□□ -0.74
MKS1-201ENST00000313863 RNASE3P12724 160 aaKnown RBP10.45□□□□□ -0.74
MKS1-201ENST00000313863 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 TIMM17AQ99595 171 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
MKS1-201ENST00000313863 DCHS1Q96JQ0 3298 aa10.44□□□□□ -0.74
MKS1-201ENST00000313863 ID1P41134 155 aa10.44□□□□□ -0.74
MKS1-201ENST00000313863 BPESC1Q9GZL8 116 aa10.44□□□□□ -0.74
MKS1-201ENST00000313863 VCX2Q9H322 139 aa10.44□□□□□ -0.74
MKS1-201ENST00000313863 CACNA1BQ00975 2339 aa10.44□□□□□ -0.74
MKS1-201ENST00000313863 MUC6Q6W4X9 2439 aa10.44□□□□□ -0.74
MKS1-201ENST00000313863 GNRH2O43555 120 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 DUSP14O95147 198 aaKnown RBP10.43□□□□□ -0.74
MKS1-201ENST00000313863 CFAP126Q5VTH2 177 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 FAM159AQ6UWV7 190 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 LCNL1Q6ZST4 164 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 TP53TG1Q9Y2A0 90 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 KIF25-AS1Q9Y6Z4 181 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 CEP295Q9C0D2 2601 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 TRBV20-1A0A075B6N2 111 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 IGHV1-69P01742 117 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 ZFP2Q6ZN57 461 aa10.43□□□□□ -0.74
MKS1-201ENST00000313863 LOC107984156A0A0G2JMH3 177 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 IGIPA6NJ69 53 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 C11orf86A6NJI1 115 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 TSPAN13O95857 204 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 POLR2KP53803 58 aaKnown RBP10.42□□□□□ -0.74
MKS1-201ENST00000313863 FOXI1Q12951 378 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 ARL17AQ8IVW1 177 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 IGLV4-69A0A075B6H9 119 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 KLLNB2CW77 178 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 CRYGDP07320 174 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 UBE2D3P61077 147 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 UBE2D2P62837 147 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 RHPN1-AS1Q9BWJ2 59 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 LINC00527Q9UJ94 153 aa10.42□□□□□ -0.74
MKS1-201ENST00000313863 A0A0J9YY99 117 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 TRBV12-3P01733 135 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 IGHG2P01859 326 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 CD7P09564 240 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 PSMB2P49721 201 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 LINC00315P59091 139 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 DAZ1Q9NQZ3 744 aaKnown RBP10.41□□□□□ -0.74
MKS1-201ENST00000313863 MUC4Q99102 2169 aa10.41□□□□□ -0.74
MKS1-201ENST00000313863 MED13LQ71F56 2210 aa10.4□□□□□ -0.74
MKS1-201ENST00000313863 TRBV6-5A0A0K0K1A5 114 aa10.4□□□□□ -0.74
MKS1-201ENST00000313863 A0A1W2PPR1 153 aa10.4□□□□□ -0.74
MKS1-201ENST00000313863 SPRY2O43597 315 aa10.4□□□□□ -0.74
MKS1-201ENST00000313863 SUMO4Q6EEV6 95 aa10.4□□□□□ -0.74
MKS1-201ENST00000313863 SPTBN1Q01082 2364 aaKnown RBP10.4□□□□□ -0.74
MKS1-201ENST00000313863 K7EMT4 169 aa10.4□□□□□ -0.75
MKS1-201ENST00000313863 NDUFA11Q86Y39 141 aa10.4□□□□□ -0.75
MKS1-201ENST00000313863 SYT8Q8NBV8 401 aa10.4□□□□□ -0.75
MKS1-201ENST00000313863 CLUHP3Q96NS8 147 aa10.4□□□□□ -0.75
MKS1-201ENST00000313863 TRBV27A0A0K0K1C4 114 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 F5H697 171 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 F6UB75 175 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 LGALS9O00182 355 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 TSHBP01222 138 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 PF4V1P10720 104 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 MTURNQ8N3F0 131 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 SLC25A29Q8N8R3 303 aa10.39□□□□□ -0.75
MKS1-201ENST00000313863 RHOHQ15669 191 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 KLHL30-AS1Q8NEE0 82 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 PPDPFLQ8WWR9 84 aa10.38□□□□□ -0.75
MKS1-201ENST00000313863 ODF3Q96PU9 254 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms