RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 SMCPP49901 116 aaPredicted RBP11.73□□□□□ -0.53
PGAP3-202ENST00000309862 MINOS1Q5TGZ0 78 aa11.73□□□□□ -0.53
PGAP3-202ENST00000309862 MINOS1-NBL1R4GNA1 71 aa11.73□□□□□ -0.53
PGAP3-202ENST00000309862 UNQ9165/PRO28630Q6UXU0 137 aa11.72□□□□□ -0.53
PGAP3-202ENST00000309862 ATP6V0BQ99437 205 aa11.72□□□□□ -0.53
PGAP3-202ENST00000309862 TRBV12-3P01733 135 aa11.72□□□□□ -0.53
PGAP3-202ENST00000309862 ARL3P36405 182 aa11.72□□□□□ -0.53
PGAP3-202ENST00000309862 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
PGAP3-202ENST00000309862 ZFAND2AQ8N6M9 145 aa11.71□□□□□ -0.53
PGAP3-202ENST00000309862 DPH3P1Q9H4G8 78 aa11.71□□□□□ -0.53
PGAP3-202ENST00000309862 OOSP1A8MZH6 123 aa11.71□□□□□ -0.54
PGAP3-202ENST00000309862 NFE4Q86UQ8 179 aa11.71□□□□□ -0.54
PGAP3-202ENST00000309862 AJUBAQ96IF1 538 aa11.71□□□□□ -0.54
PGAP3-202ENST00000309862 VPS13CQ709C8 3753 aa11.71□□□□□ -0.54
PGAP3-202ENST00000309862 RNF223E7ERA6 249 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 SIRPDQ9H106 197 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 SCGB1A1P11684 91 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 ASIPP42127 132 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 FOXI1Q12951 378 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 SPOCK3Q9BQ16 436 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 JPT2Q9H910 190 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 TSPAN13O95857 204 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 CKS1BP61024 79 aa11.7□□□□□ -0.54
PGAP3-202ENST00000309862 MUC4Q99102 2169 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.69□□□□□ -0.544e-7■■■□□ 14.6
PGAP3-202ENST00000309862 A0A1B0GV72 72 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 C11orf86A6NJI1 115 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 SRD5A1P18405 259 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 TCF15Q12870 199 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 DLX4Q92988 240 aaPredicted RBP11.69□□□□□ -0.54
PGAP3-202ENST00000309862 CLUHP3Q96NS8 147 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 SORL1Q92673 2214 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 CHD8Q9HCK8 2581 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 RPL39P62891 51 aaKnown RBP11.69□□□□□ -0.54
PGAP3-202ENST00000309862 CFAP126Q5VTH2 177 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 OR10J6PQ8NGY7 276 aa11.69□□□□□ -0.54
PGAP3-202ENST00000309862 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 CRYGDP07320 174 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 C1orf122Q6ZSJ8 110 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 GPHB5Q86YW7 130 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 SPG11Q96JI7 2443 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 TRAV21A0A0B4J279 112 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
PGAP3-202ENST00000309862 U3KQE9 123 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 C11orf71Q6IPW1 123 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 Q6ZS46 218 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 TP53TG1Q9Y2A0 90 aa11.68□□□□□ -0.54
PGAP3-202ENST00000309862 CENPVL3A0A0U1RRI6 287 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 A0A1W2PPR1 153 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 FHL3Q13643 280 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 ITLN2Q8WWU7 325 aaPredicted RBP11.67□□□□□ -0.54
PGAP3-202ENST00000309862 C1QTNF4Q9BXJ3 329 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 CREBBPQ92793 2442 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 A0A087WWL8 130 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 TSHBP01222 138 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 COX6B1P14854 86 aa11.67□□□□□ -0.54
PGAP3-202ENST00000309862 UBE2E1P51965 193 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 C9orf139Q6ZV77 190 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 SPTBN4Q9H254 2564 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 A6NJY4 79 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 MT-ATP8P03928 68 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
PGAP3-202ENST00000309862 TMEM170BQ5T4T1 132 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 CDIP1Q9H305 208 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
PGAP3-202ENST00000309862 F5H697 171 aa11.65□□□□□ -0.54
PGAP3-202ENST00000309862 LINC01619G3V211 115 aa11.65□□□□□ -0.54
PGAP3-202ENST00000309862 UBE2D1P51668 147 aa11.65□□□□□ -0.54
PGAP3-202ENST00000309862 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
PGAP3-202ENST00000309862 TSPEAR-AS2P59090 65 aa11.65□□□□□ -0.54
PGAP3-202ENST00000309862 TRAV41A0A0B4J266 112 aa11.65□□□□□ -0.55
PGAP3-202ENST00000309862 CD7P09564 240 aa11.65□□□□□ -0.55
PGAP3-202ENST00000309862 ADORA2A-AS1P86434 159 aa11.65□□□□□ -0.55
PGAP3-202ENST00000309862 C5orf56Q8N8D9 126 aa11.65□□□□□ -0.55
PGAP3-202ENST00000309862 IGLV4-69A0A075B6H9 119 aa11.64□□□□□ -0.55
PGAP3-202ENST00000309862 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
PGAP3-202ENST00000309862 A0A0J9YY99 117 aa11.64□□□□□ -0.55
PGAP3-202ENST00000309862 TCL1BO95988 128 aa11.64□□□□□ -0.55
PGAP3-202ENST00000309862 NDUFA11Q86Y39 141 aa11.64□□□□□ -0.55
PGAP3-202ENST00000309862 UBTD1Q9HAC8 227 aa11.63□□□□□ -0.55
PGAP3-202ENST00000309862 H7C2G1 150 aa11.63□□□□□ -0.55
PGAP3-202ENST00000309862 FBXL19-AS1Q494R0 122 aa11.63□□□□□ -0.55
PGAP3-202ENST00000309862 FAM74A4Q5TZK3 123 aa11.63□□□□□ -0.55
PGAP3-202ENST00000309862 BRD3OSQ6XYD6 125 aa11.63□□□□□ -0.55
PGAP3-202ENST00000309862 CARD19Q96LW7 228 aa11.63□□□□□ -0.55
PGAP3-202ENST00000309862 OPRPNQ99935 248 aaPredicted RBP11.63□□□□□ -0.55
PGAP3-202ENST00000309862 TRAV26-1A0A087WT03 109 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 SCGB1C2P0DMR2 95 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 IGHV3-64A0A075B6Q5 118 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 NPFFO15130 113 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 XGP55808 180 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 BPESC1Q9GZL8 116 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 CSPG4Q6UVK1 2322 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 CFC1P0CG37 223 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 EDN2P20800 178 aa11.62□□□□□ -0.55
PGAP3-202ENST00000309862 RAX2Q96IS3 184 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms