RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 TSPOP30536 169 aa6.42□□□□□ -1.38
LCLAT1-201ENST00000309052 MRPL16Q9NX20 251 aaKnown RBP6.42□□□□□ -1.38
LCLAT1-201ENST00000309052 TRGV1A0A0A0MS02 117 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 RNASE1P07998 156 aaKnown RBP6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 SPATA3Q8NHX4 192 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 A0A0J9YX75 114 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 RPL39LQ96EH5 51 aaKnown RBP6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 C14orf144Q96I85 54 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 C7orf71A4D174 169 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 ZNF324O75467 553 aaPredicted RBP6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 RPS20P60866 119 aaKnown RBP6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 IGHV3-38A0A0C4DH36 116 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 IGKV3OR2-268A0A0C4DH90 116 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 K7EMT4 169 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 CRIP2P52943 208 aaPredicted RBP6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 PHLDA1Q8WV24 401 aaPredicted RBP6.41□□□□□ -1.38
LCLAT1-201ENST00000309052 MAP6D1Q9H9H5 199 aa6.4□□□□□ -1.38
LCLAT1-201ENST00000309052 OXLD1Q5BKU9 147 aa6.4□□□□□ -1.38
LCLAT1-201ENST00000309052 C9orf47Q6ZRZ4 202 aa6.4□□□□□ -1.38
LCLAT1-201ENST00000309052 Q6ZWC4 215 aa6.4□□□□□ -1.38
LCLAT1-201ENST00000309052 FAM104BQ5XKR9 115 aa6.4□□□□□ -1.39
LCLAT1-201ENST00000309052 A0A087X0K7 114 aa6.4□□□□□ -1.39
LCLAT1-201ENST00000309052 FBLL1A6NHQ2 334 aaKnown RBP6.4□□□□□ -1.39
LCLAT1-201ENST00000309052 COX19Q49B96 90 aa6.4□□□□□ -1.39
LCLAT1-201ENST00000309052 VAMP8Q9BV40 100 aa6.4□□□□□ -1.39
LCLAT1-201ENST00000309052 MAP1LC3AQ9H492 121 aa6.4□□□□□ -1.39
LCLAT1-201ENST00000309052 TRGV2A0A075B6R0 118 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 TSTD3H0UI37 97 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 NUDT3O95989 172 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 DUSP14O95147 198 aaKnown RBP6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 C3orf79P0CE67 100 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 P0DMU3 169 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 FAM231AP0DMU4 169 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 FAM231CP0DMU5 169 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 IGLL1P15814 213 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 PROK1P58294 105 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 IGHV1OR15-1A0A075B7D0 117 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 LEPP41159 167 aa6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
LCLAT1-201ENST00000309052 A0A096LPF7 62 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 TNFRSF6BO95407 300 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 ATP5L2Q7Z4Y8 100 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 TMEM86BQ8N661 226 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 SIGLEC8Q9NYZ4 499 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 SMIM6P0DI80 62 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 RRN3P1Q2M238 152 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 ODF3L2Q3SX64 289 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 AP1S3Q96PC3 154 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 TRAV9-1A0A075B6T8 112 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 GAGE12BA1L429 117 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 LINC00587B1AMM8 73 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 H3BMM0 161 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 GAGE7O76087 117 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 GAGE12FP0CL80 117 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 GAGE12GP0CL81 117 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 GAGE12IP0CL82 117 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 Q6AWC8 147 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 MRAPQ8TCY5 172 aa6.38□□□□□ -1.39
LCLAT1-201ENST00000309052 FCER1GP30273 86 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 CT83Q5H943 113 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 hDV102S1A0JD36 115 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 CRLF1O75462 422 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 RNASE13Q5GAN3 156 aaKnown RBP6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 GTSCR1Q86UQ5 136 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 SOCS3O14543 225 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 LINC00310P59036 64 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 SMIM12Q96EX1 92 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 ATP6V0BQ99437 205 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 NOP10Q9NPE3 64 aaKnown RBP6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 A0A1B0GXF2 115 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 AZU1P20160 251 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 CACNG7P62955 275 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 DEFB121Q5J5C9 76 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 FOXI2Q6ZQN5 318 aa6.37□□□□□ -1.39
LCLAT1-201ENST00000309052 HSBP1L1C9JCN9 74 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 OR10J3Q5JRS4 329 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 SPAG8Q99932 426 aaPredicted RBP6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 KRTAP10-3P60369 221 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 TMEM158Q8WZ71 300 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 GFRA4Q9GZZ7 299 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 IGHV1-24A0A0C4DH33 117 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 DEFA6Q01524 100 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 TMEM160Q9NX00 188 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 NMUP48645 174 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 ZC2HC1BQ5TFG8 222 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 OR2K2Q8NGT1 345 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 CSTL1Q9H114 145 aa6.36□□□□□ -1.39
LCLAT1-201ENST00000309052 RBAKDNA6NC62 111 aa6.35□□□□□ -1.39
LCLAT1-201ENST00000309052 LINC01559Q495D7 138 aa6.35□□□□□ -1.39
LCLAT1-201ENST00000309052 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
LCLAT1-201ENST00000309052 TENM3Q9P273 2699 aa6.35□□□□□ -1.39
LCLAT1-201ENST00000309052 C20orf202A1L168 122 aa6.35□□□□□ -1.39
LCLAT1-201ENST00000309052 TMEM89A2RUT3 159 aa6.35□□□□□ -1.39
LCLAT1-201ENST00000309052 SYT8Q8NBV8 401 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms