RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 H0Y8G0 127 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 ANXA2RQ3ZCQ2 193 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 MAP1LC3CQ9BXW4 147 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 FN1P02751 2386 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 FHL3Q13643 280 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 SPANXN1Q5VSR9 72 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 APRG1Q8IVJ8 170 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 MCRIP2Q9BUT9 160 aaKnown RBP16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 SNHG12Q9BXW3 62 aa16.72■□□□□ 0.27
PDLIM2-202ENST00000308354 TRAV9-2A0A087WT02 112 aa16.71■□□□□ 0.27
PDLIM2-202ENST00000308354 OR4C46A6NHA9 309 aa16.71■□□□□ 0.27
PDLIM2-202ENST00000308354 PPBPP02775 128 aa16.71■□□□□ 0.27
PDLIM2-202ENST00000308354 FXYD7P58549 80 aa16.71■□□□□ 0.27
PDLIM2-202ENST00000308354 ZNF124Q15973 351 aa16.71■□□□□ 0.27
PDLIM2-202ENST00000308354 TRAV12-2A0A075B6T6 113 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 KLLNB2CW77 178 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 TCF21O43680 179 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 GATA1P15976 413 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 DEFB114Q30KQ6 69 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 CD300EQ496F6 205 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 LBHQ53QV2 105 aaPredicted RBP16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 JMJD8Q96S16 334 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 GNRH2O43555 120 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 DEFB131AP59861 70 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 ZNF747Q9BV97 191 aa16.7■□□□□ 0.26
PDLIM2-202ENST00000308354 IGHV4-4A0A075B6R2 117 aa16.69■□□□□ 0.26
PDLIM2-202ENST00000308354 TRAV12-3A0A0B4J271 114 aa16.69■□□□□ 0.26
PDLIM2-202ENST00000308354 TRBV7-9A0A0J9YWB2 115 aa16.69■□□□□ 0.26
PDLIM2-202ENST00000308354 IGLC3P0DOY3 106 aa16.69■□□□□ 0.26
PDLIM2-202ENST00000308354 PROK1P58294 105 aa16.69■□□□□ 0.26
PDLIM2-202ENST00000308354 KNCNA6PVL3 124 aa16.69■□□□□ 0.26
PDLIM2-202ENST00000308354 C20orf202A1L168 122 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 NDUFA7O95182 113 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 TNFRSF6BO95407 300 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 CACNG7P62955 275 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 SPINK13Q1W4C9 94 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 C2orf88Q9BSF0 95 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 MAP1LC3AQ9H492 121 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 IGLL1P15814 213 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 NSUN5P1Q3KNT7 163 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 PET117Q6UWS5 81 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 SMIM15Q7Z3B0 74 aa16.68■□□□□ 0.26
PDLIM2-202ENST00000308354 S100A4P26447 101 aaKnown RBP16.67■□□□□ 0.26
PDLIM2-202ENST00000308354 TRAV26-2A0A0B4J265 109 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 A0A1B0GV90 55 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 M0R143 59 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 ASIPP42127 132 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 FOXI2Q6ZQN5 318 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 PMCHL2Q9BQD1 86 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 UQCR10Q9UDW1 63 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 LAMTOR2Q9Y2Q5 125 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 M0R381 172 aa16.66■□□□□ 0.26
PDLIM2-202ENST00000308354 C2CD3Q4AC94 2353 aa16.65■□□□□ 0.26
PDLIM2-202ENST00000308354 KRTAP10-3P60369 221 aa16.65■□□□□ 0.26
PDLIM2-202ENST00000308354 C7orf71A4D174 169 aa16.64■□□□□ 0.25
PDLIM2-202ENST00000308354 ADARB2-AS1A8MUL3 147 aa16.64■□□□□ 0.25
PDLIM2-202ENST00000308354 HBDP02042 147 aa16.64■□□□□ 0.25
PDLIM2-202ENST00000308354 LEPP41159 167 aa16.64■□□□□ 0.25
PDLIM2-202ENST00000308354 MUC4Q99102 2169 aa16.64■□□□□ 0.25
PDLIM2-202ENST00000308354 hDV102S1A0JD36 115 aa16.63■□□□□ 0.25
PDLIM2-202ENST00000308354 CDKN1BP46527 198 aa16.63■□□□□ 0.25
PDLIM2-202ENST00000308354 LINC01545Q5VT33 79 aa16.63■□□□□ 0.25
PDLIM2-202ENST00000308354 FAM159AQ6UWV7 190 aa16.63■□□□□ 0.25
PDLIM2-202ENST00000308354 PHLDA3Q9Y5J5 127 aa16.63■□□□□ 0.25
PDLIM2-202ENST00000308354 DUSP14O95147 198 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 AMTNQ6UX39 209 aa16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 Q6ZN92 141 aa16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 OR2K2Q8NGT1 345 aa16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 ODF3Q96PU9 254 aa16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 RNASE3P12724 160 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 MAP6D1Q9H9H5 199 aa16.62■□□□□ 0.25
PDLIM2-202ENST00000308354 NRACQ8N912 160 aa16.61■□□□□ 0.25
PDLIM2-202ENST00000308354 NXT2Q9NPJ8 142 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-202ENST00000308354 SCRT2Q9NQ03 307 aa16.61■□□□□ 0.25
PDLIM2-202ENST00000308354 ZNF256Q9Y2P7 627 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-202ENST00000308354 LINC01546A6NGU7 62 aa16.6■□□□□ 0.25
PDLIM2-202ENST00000308354 TRAV2A0A0B4J234 112 aa16.6■□□□□ 0.25
PDLIM2-202ENST00000308354 CD7P09564 240 aa16.6■□□□□ 0.25
PDLIM2-202ENST00000308354 H3BMM0 161 aa16.59■□□□□ 0.25
PDLIM2-202ENST00000308354 MED14OSP0DP75 135 aa16.59■□□□□ 0.25
PDLIM2-202ENST00000308354 HLA-DRB4P13762 266 aa16.59■□□□□ 0.25
PDLIM2-202ENST00000308354 HNRNPA3P51991 378 aaKnown RBP16.59■□□□□ 0.25
PDLIM2-202ENST00000308354 SPAG8Q99932 426 aaPredicted RBP16.59■□□□□ 0.25
PDLIM2-202ENST00000308354 HLA-DRB4X5D2U9 266 aa16.59■□□□□ 0.25
PDLIM2-202ENST00000308354 RBMY1BA6NDE4 496 aaKnown RBP16.58■□□□□ 0.25
PDLIM2-202ENST00000308354 RBMY1EA6NEQ0 496 aaKnown RBP16.58■□□□□ 0.25
PDLIM2-202ENST00000308354 SAP30O75446 220 aa16.58■□□□□ 0.25
PDLIM2-202ENST00000308354 RBMY1DP0C7P1 496 aaKnown RBP16.58■□□□□ 0.25
PDLIM2-202ENST00000308354 TSPOP30536 169 aa16.58■□□□□ 0.25
PDLIM2-202ENST00000308354 C14orf178Q8N769 122 aaPredicted RBP16.58■□□□□ 0.25
PDLIM2-202ENST00000308354 IGLV2-18A0A075B6J9 118 aa16.58■□□□□ 0.24
PDLIM2-202ENST00000308354 MRPL52Q86TS9 123 aaKnown RBP16.58■□□□□ 0.24
PDLIM2-202ENST00000308354 TP73-AS1Q9UF72 201 aa16.58■□□□□ 0.24
PDLIM2-202ENST00000308354 Q8N8P6 123 aa16.57■□□□□ 0.24
PDLIM2-202ENST00000308354 ST20Q9HBF5 79 aa16.57■□□□□ 0.24
PDLIM2-202ENST00000308354 CRLF1O75462 422 aa16.57■□□□□ 0.24
PDLIM2-202ENST00000308354 BATFQ16520 125 aa16.57■□□□□ 0.24
PDLIM2-202ENST00000308354 IFI27L1Q96BM0 104 aa16.57■□□□□ 0.24
PDLIM2-202ENST00000308354 MRAP2Q96G30 205 aa16.56■□□□□ 0.24
PDLIM2-202ENST00000308354 DPH3P1Q9H4G8 78 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms