RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 TMEM238LA0A1B0GVL6 79 aa13.78□□□□□ -0.2
RETREG1-201ENST00000306320 A6NJY4 79 aa13.78□□□□□ -0.2
RETREG1-201ENST00000306320 CLEC3BP05452 202 aa13.78□□□□□ -0.2
RETREG1-201ENST00000306320 CFAP126Q5VTH2 177 aa13.78□□□□□ -0.2
RETREG1-201ENST00000306320 TRPT1Q86TN4 253 aaKnown RBP13.78□□□□□ -0.2
RETREG1-201ENST00000306320 USP9XQ93008 2570 aaPredicted RBP13.78□□□□□ -0.2
RETREG1-201ENST00000306320 IGKV3D-20A0A0C4DH25 116 aa13.77□□□□□ -0.2
RETREG1-201ENST00000306320 PLNP26678 52 aa13.77□□□□□ -0.2
RETREG1-201ENST00000306320 TMEM30BQ3MIR4 351 aa13.77□□□□□ -0.2
RETREG1-201ENST00000306320 TIMD4Q96H15 378 aa13.77□□□□□ -0.2
RETREG1-201ENST00000306320 DPM3Q9P2X0 92 aa13.77□□□□□ -0.2
RETREG1-201ENST00000306320 TRBV7-3A0A075B6L6 115 aa13.77□□□□□ -0.21
RETREG1-201ENST00000306320 F5H697 171 aa13.76□□□□□ -0.21
RETREG1-201ENST00000306320 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
RETREG1-201ENST00000306320 CARD19Q96LW7 228 aa13.76□□□□□ -0.21
RETREG1-201ENST00000306320 ZMAT4Q9H898 229 aa13.76□□□□□ -0.21
RETREG1-201ENST00000306320 TTC32Q5I0X7 151 aa13.76□□□□□ -0.21
RETREG1-201ENST00000306320 IGF1P05019 195 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 PPDPFLQ8WWR9 84 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 MSRB2Q9Y3D2 182 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 ZANQ9Y493 2812 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 NBR2O15453 112 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 SNCGO76070 127 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 NPC2P61916 151 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 KLRB1Q12918 225 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 GATD1Q8NB37 220 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 LRRK2Q5S007 2527 aa13.75□□□□□ -0.21
RETREG1-201ENST00000306320 MRPS12O15235 138 aaKnown RBP13.74□□□□□ -0.21
RETREG1-201ENST00000306320 C2orf66Q6UXQ4 117 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 TRAV2A0A0B4J234 112 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 CRYGBP07316 175 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 TMEM219Q86XT9 240 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 ABCA12Q86UK0 2595 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 AGPAT4-IT1Q9H0P7 198 aa13.74□□□□□ -0.21
RETREG1-201ENST00000306320 CRIP2P52943 208 aaPredicted RBP13.73□□□□□ -0.21
RETREG1-201ENST00000306320 GAGE2BQ13066 116 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 GAGE2EQ4V326 116 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 Q6ZS46 218 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 GAGE2DQ9UEU5 116 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 NACAE9PAV3 2078 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 CLEC19AQ6UXS0 136 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 C2CD3Q4AC94 2353 aa13.73□□□□□ -0.21
RETREG1-201ENST00000306320 SETD2Q9BYW2 2564 aaPredicted RBP13.73□□□□□ -0.21
RETREG1-201ENST00000306320 ZNF688P0C7X2 276 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 ERG28Q9UKR5 140 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 C19orf84I3L1E1 186 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 HERV-K104P63124 156 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 TEN1Q86WV5 123 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 PHLDA3Q9Y5J5 127 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 DUSP14O95147 198 aaKnown RBP13.72□□□□□ -0.21
RETREG1-201ENST00000306320 GAGE5Q13069 117 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 GAGE6Q13070 117 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 PDE6HQ13956 83 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 FAM74A4Q5TZK3 123 aa13.72□□□□□ -0.21
RETREG1-201ENST00000306320 CCDC179H3BU77 68 aa13.71□□□□□ -0.21
RETREG1-201ENST00000306320 OR11H6Q8NGC7 330 aa13.71□□□□□ -0.21
RETREG1-201ENST00000306320 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.21
RETREG1-201ENST00000306320 ADARB2-AS1A8MUL3 147 aa13.71□□□□□ -0.22
RETREG1-201ENST00000306320 G3V318 75 aa13.71□□□□□ -0.22
RETREG1-201ENST00000306320 PRSS2P07478 247 aa13.71□□□□□ -0.22
RETREG1-201ENST00000306320 NTN5Q8WTR8 489 aaPredicted RBP13.71□□□□□ -0.22
RETREG1-201ENST00000306320 TAL2Q16559 108 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 FANCD2OSQ96PS1 177 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 TRAV4A0A0B4J268 109 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 TRBV6-1A0A0K0K1D8 114 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 RPL39P62891 51 aaKnown RBP13.7□□□□□ -0.22
RETREG1-201ENST00000306320 SHISA2Q6UWI4 295 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 BPESC1Q9GZL8 116 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 AJUBAQ96IF1 538 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 C16orf92Q96LL3 132 aa13.7□□□□□ -0.22
RETREG1-201ENST00000306320 CRLF1O75462 422 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 SUMO2P61956 95 aaKnown RBP13.69□□□□□ -0.22
RETREG1-201ENST00000306320 C15orf32Q32M92 178 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 BRD3OSQ6XYD6 125 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 NRACQ8N912 160 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 ZNF256Q9Y2P7 627 aaPredicted RBP13.69□□□□□ -0.22
RETREG1-201ENST00000306320 SLC25A20O43772 301 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 IGHG4P01861 327 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 GNLYP22749 145 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 C5orf64Q2M2E5 130 aa13.69□□□□□ -0.22
RETREG1-201ENST00000306320 BAALCQ8WXS3 180 aa13.68□□□□□ -0.22
RETREG1-201ENST00000306320 LY6LH3BQJ8 138 aa13.68□□□□□ -0.22
RETREG1-201ENST00000306320 C11orf86A6NJI1 115 aa13.68□□□□□ -0.22
RETREG1-201ENST00000306320 SONP18583 2426 aaKnown RBP13.67□□□□□ -0.22
RETREG1-201ENST00000306320 IGLV2-18A0A075B6J9 118 aa13.67□□□□□ -0.22
RETREG1-201ENST00000306320 CTSGP08311 255 aa13.67□□□□□ -0.22
RETREG1-201ENST00000306320 SRD5A1P18405 259 aa13.67□□□□□ -0.22
RETREG1-201ENST00000306320 RASL10AQ92737 203 aa13.67□□□□□ -0.22
RETREG1-201ENST00000306320 PTPN13Q12923 2485 aa13.67□□□□□ -0.22
RETREG1-201ENST00000306320 A0A087WWL8 130 aa13.67□□□□□ -0.22
RETREG1-201ENST00000306320 ZNF575Q86XF7 245 aa13.66□□□□□ -0.22
RETREG1-201ENST00000306320 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
RETREG1-201ENST00000306320 OPRPNQ99935 248 aaPredicted RBP13.66□□□□□ -0.22
RETREG1-201ENST00000306320 TP53TG1Q9Y2A0 90 aa13.66□□□□□ -0.22
RETREG1-201ENST00000306320 F6UB75 175 aa13.66□□□□□ -0.22
RETREG1-201ENST00000306320 LYRM7Q5U5X0 104 aa13.66□□□□□ -0.22
RETREG1-201ENST00000306320 C8orf31Q8N9H6 132 aa13.66□□□□□ -0.22
RETREG1-201ENST00000306320 RNASE4P34096 147 aaKnown RBP13.65□□□□□ -0.22
RETREG1-201ENST00000306320 LY6EQ16553 131 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms