RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 PRR20CP86479 221 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 PRR20DP86480 221 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 PRR20BP86481 221 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 PRR20AP86496 221 aa6.01□□□□□ -1.45
SCN9A-201ENST00000303354 SIGMAR1Q99720 223 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 APC2O95996 2303 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 NDUFAF3Q9BU61 184 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 LRRK1Q38SD2 2015 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 DEFB131BA0A096LNP1 70 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 C18orf32Q8TCD1 76 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 KRTAP10-9P60411 292 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 C5orf47Q569G3 176 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 KAAG1Q9UBP8 84 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 I3L2K1 104 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 SEC16AO15027 2179 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 C16orf54Q6UWD8 224 aa6□□□□□ -1.45
SCN9A-201ENST00000303354 LOC105371267A0A1B0GV96 52 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 CTSGP08311 255 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 V9GYV3 84 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 MAP6D1Q9H9H5 199 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 K7EIM0 57 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 DAZAP2Q15038 168 aaPredicted RBP5.99□□□□□ -1.45
SCN9A-201ENST00000303354 LINC00526Q96FQ7 95 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 C1orf147Q96MC9 270 aaPredicted RBP5.99□□□□□ -1.45
SCN9A-201ENST00000303354 KIF26AQ9ULI4 1882 aaPredicted RBP5.99□□□□□ -1.45
SCN9A-201ENST00000303354 HIGD2AQ9BW72 106 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 FAM231BA6NCW3 169 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 COX11Q9Y6N1 276 aa5.99□□□□□ -1.45
SCN9A-201ENST00000303354 AHCTF1Q8WYP5 2266 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 CCL25O15444 150 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 CDSNQ15517 529 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.98□□□□□ -1.45
SCN9A-201ENST00000303354 FREM3P0C091 2139 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 A0A087WZ39 114 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 FAM222AQ5U5X8 452 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 Q6ZS46 218 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 MRPL36Q9P0J6 103 aaKnown RBP5.98□□□□□ -1.45
SCN9A-201ENST00000303354 H0Y9J4 135 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 LINC00269Q8N2A0 174 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 H3BUA1 57 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 J3QQQ9 107 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 CRYGDP07320 174 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 FAM19A5Q7Z5A7 132 aaPredicted RBP5.98□□□□□ -1.45
SCN9A-201ENST00000303354 IGLV11-55A0A075B6I3 123 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 A0A0J9YXV3 536 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 A6NDX4 124 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 Q6ZS49 121 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 Q6ZTI0 123 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 CARD19Q96LW7 228 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 GFRA4Q9GZZ7 299 aa5.98□□□□□ -1.45
SCN9A-201ENST00000303354 ZNF664Q8N3J9 261 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 PROK1P58294 105 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 RTTNQ86VV8 2226 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 UTRNP46939 3433 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 CHKB-CPT1BH3BT56 60 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 Q6ZVH6 145 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 NDUFA11Q86Y39 141 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 TRBV24-1A0A075B6N3 115 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 HILS1P60008 231 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 SLC25A29Q8N8R3 303 aa5.97□□□□□ -1.45
SCN9A-201ENST00000303354 HEATR1Q9H583 2144 aaKnown RBP5.97□□□□□ -1.45
SCN9A-201ENST00000303354 FNDC10F2Z333 226 aa5.96□□□□□ -1.45
SCN9A-201ENST00000303354 TMEM190Q8WZ59 177 aa5.96□□□□□ -1.45
SCN9A-201ENST00000303354 A0A0J9YWU9 116 aa5.96□□□□□ -1.45
SCN9A-201ENST00000303354 SMIM27A0A1W2PRY6 76 aa5.96□□□□□ -1.45
SCN9A-201ENST00000303354 POLR3KQ9Y2Y1 108 aaPredicted RBP5.96□□□□□ -1.45
SCN9A-201ENST00000303354 ARFGEF3Q5TH69 2177 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 Q6YL49 198 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 LINC00173Q6ZV60 143 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 TMEM14CQ9P0S9 112 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 PATE2Q6UY27 113 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 BAALCQ8WXS3 180 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 C14orf132Q9NPU4 83 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 SPAG11BQ08648 103 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 ZDBF2Q9HCK1 2354 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 UBL5Q9BZL1 73 aa5.96□□□□□ -1.46
SCN9A-201ENST00000303354 Q6ZSV7 163 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 NANOS2P60321 138 aaKnown RBP5.95□□□□□ -1.46
SCN9A-201ENST00000303354 TTTY13Q9BZ97 58 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 IGKV1D-37A0A075B6S9 117 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 TEX22C9J3V5 150 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 CEND1Q8N111 149 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 DCANP1Q8TF63 244 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 LTAP01374 205 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 PCP2Q8IVA1 136 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 MYLKQ15746 1914 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 GTF3C1Q12789 2109 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 H3BMG7 143 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 BAALC-AS2P0C853 105 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 MUSTN1Q8IVN3 82 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 ODF3L1Q8IXM7 274 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 CRYBA4P53673 196 aa5.95□□□□□ -1.46
SCN9A-201ENST00000303354 TRAV13-2A0A0B4J235 113 aa5.94□□□□□ -1.46
SCN9A-201ENST00000303354 TRAV1-1A0A0B4J248 108 aa5.94□□□□□ -1.46
SCN9A-201ENST00000303354 GDF5OSQ5U4N7 250 aa5.94□□□□□ -1.46
SCN9A-201ENST00000303354 ZFP2Q6ZN57 461 aa5.94□□□□□ -1.46
SCN9A-201ENST00000303354 FAM19A1Q7Z5A9 133 aa5.94□□□□□ -1.46
SCN9A-201ENST00000303354 INTS1Q8N201 2190 aaKnown RBP5.94□□□□□ -1.46
SCN9A-201ENST00000303354 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms