RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TRAV25A0A0B4J276 109 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 PIFOQ8TCI5 191 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 DYNAPQ8N1N2 210 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 Q9H8V8 135 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 COL5A1P20908 1838 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-201ENST00000302516 H3BT86 120 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 PRB4P10163 310 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-201ENST00000302516 NTN5Q8WTR8 489 aaPredicted RBP6.02□□□□□ -1.45
SF3B3-201ENST00000302516 TOMM6Q96B49 74 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 XCL2Q9UBD3 114 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 FAM120AOSQ5T036 256 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 ZNF491Q8N8L2 437 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 COL4A6Q14031 1691 aa6.02□□□□□ -1.45
SF3B3-201ENST00000302516 DUX4L9Q6RFH8 374 aaPredicted RBP6.01□□□□□ -1.45
SF3B3-201ENST00000302516 CXCL5P42830 114 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 KNCNA6PVL3 124 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 LHBP01229 141 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 PCP2Q8IVA1 136 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 C16orf74Q96GX8 76 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 Q6ZSR3 168 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 JMJD7-PLA2G4BH0Y9G9 81 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 MP68P56378 58 aa6.01□□□□□ -1.45
SF3B3-201ENST00000302516 G3V4G9 280 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 PROK2Q9HC23 129 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 C11orf86A6NJI1 115 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 K7EQD1 137 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 AMTNQ6UX39 209 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 DEFB104AQ8WTQ1 72 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 TIMM17AQ99595 171 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 IGHV3-16A0A0C4DH30 117 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 B5MCH6 92 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 SS18L2Q9UHA2 77 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 C22orf46C9J442 243 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 TPSG1Q9NRR2 321 aa6□□□□□ -1.45
SF3B3-201ENST00000302516 RUSC1-AS1Q66K80 236 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 G3V318 75 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 OPRPNQ99935 248 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-201ENST00000302516 LRP4O75096 1905 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 FOXI1Q12951 378 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 LINC01620Q4KN68 170 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 TRAV12-2A0A075B6T6 113 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 ZFP2Q6ZN57 461 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 DSCAML1Q8TD84 2053 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 COX7B2Q8TF08 81 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 ANGP03950 147 aaKnown RBP5.99□□□□□ -1.45
SF3B3-201ENST00000302516 ATP5EP2Q5VTU8 51 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 C9orf47Q6ZRZ4 202 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 VPREB3Q9UKI3 123 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 CRYGCP07315 174 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 LY6DQ14210 128 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 RSPO1Q2MKA7 263 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-201ENST00000302516 ARTNQ5T4W7 220 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 ZNRD1Q9P1U0 126 aa5.99□□□□□ -1.45
SF3B3-201ENST00000302516 E9PLD3 99 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 TINCRA0A1B0GVN0 87 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 MRPL36Q9P0J6 103 aaKnown RBP5.98□□□□□ -1.45
SF3B3-201ENST00000302516 A0A1B0GX51 115 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 MED13LQ71F56 2210 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 ANKHD1Q8IWZ3 2542 aaKnown RBP5.98□□□□□ -1.45
SF3B3-201ENST00000302516 PSMB8P28062 276 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 SPATA12Q7Z6I5 190 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 TRBV10-2A0A0K0K1G8 114 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 WIPF3A6NGB9 483 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 K7ENP7 123 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 LGALS9O00182 355 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 GNLYP22749 145 aa5.98□□□□□ -1.45
SF3B3-201ENST00000302516 I3L2K1 104 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 AGPAT4-IT1Q9H0P7 198 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 LY6G6EA0A0G2JKS1 128 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 ACACBO00763 2458 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 BAALCQ8WXS3 180 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 U3KQA8 63 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 AGRNO00468 2067 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 PRR14LQ5THK1 2151 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 CFHR3Q02985 330 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 IGHV3-38A0A0C4DH36 116 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 TMEM256-PLSCR3K7ERE1 68 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 NXPH4O95158 308 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 VSIG2Q96IQ7 327 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 IGLV11-55A0A075B6I3 123 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 TAX1BP3O14907 124 aa5.97□□□□□ -1.45
SF3B3-201ENST00000302516 CDPF1Q6NVV7 123 aa5.96□□□□□ -1.45
SF3B3-201ENST00000302516 A4D1N5 150 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 ZNF503-AS2A6NEH8 195 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 XCL1P47992 114 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 MRPL23Q16540 153 aaKnown RBP5.96□□□□□ -1.46
SF3B3-201ENST00000302516 ATP5EP56381 51 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-201ENST00000302516 COL4A4P53420 1690 aaPredicted RBP5.96□□□□□ -1.46
SF3B3-201ENST00000302516 COX7A2LO14548 114 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 ODF1Q14990 250 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 NDUFB1O75438 58 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 FAM167A-AS1Q96KT0 104 aa5.96□□□□□ -1.46
SF3B3-201ENST00000302516 TRBV7-3A0A075B6L6 115 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 C11orf53Q8IXP5 236 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 TMEM89A2RUT3 159 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 MUSTN1Q8IVN3 82 aa5.95□□□□□ -1.46
SF3B3-201ENST00000302516 Q8N1Y9 231 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms