RNA–Protein interactions for RNA: ENST00000302445.7

KARS-201, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best) BASIC

Gene KARS, Length 2,005 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-201ENST00000302445 NHLRC4P0CG21 123 aaPredicted RBP10.5□□□□□ -0.73
KARS-201ENST00000302445 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
KARS-201ENST00000302445 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
KARS-201ENST00000302445 KLHL30-AS1Q8NEE0 82 aa10.5□□□□□ -0.73
KARS-201ENST00000302445 ITLN2Q8WWU7 325 aaPredicted RBP10.5□□□□□ -0.73
KARS-201ENST00000302445 AJUBAQ96IF1 538 aa10.5□□□□□ -0.73
KARS-201ENST00000302445 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
KARS-201ENST00000302445 DSPP15924 2871 aaKnown RBP10.49□□□□□ -0.73
KARS-201ENST00000302445 TRBV7-1A0A0A6YYK4 115 aa10.49□□□□□ -0.73
KARS-201ENST00000302445 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
KARS-201ENST00000302445 GATA3P23771 443 aa10.49□□□□□ -0.73
KARS-201ENST00000302445 GPHB5Q86YW7 130 aa10.49□□□□□ -0.73
KARS-201ENST00000302445 AMELXQ99217 191 aa10.49□□□□□ -0.73
KARS-201ENST00000302445 PTPRZ1P23471 2315 aaPredicted RBP10.49□□□□□ -0.73
KARS-201ENST00000302445 OVOL1O14753 267 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
KARS-201ENST00000302445 TSHBP01222 138 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 IGHV3-33P01772 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 S100A4P26447 101 aaKnown RBP10.48□□□□□ -0.73
KARS-201ENST00000302445 ZNF876PQ49A33 203 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 EEF1AKMT3Q96AZ1 226 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 SS18L2Q9UHA2 77 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 A0A0J9YX75 114 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 GAGE12JA6NER3 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 GAGE7O76087 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 GAGE12FP0CL80 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 GAGE12GP0CL81 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 GAGE12IP0CL82 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 GAGE4Q13068 117 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 ATXN8Q156A1 80 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 PRR9Q5T870 116 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 ZFAND2AQ8N6M9 145 aa10.48□□□□□ -0.73
KARS-201ENST00000302445 C9JAW5 83 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 J3QQQ9 107 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 SFTA2Q6UW10 78 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 C14orf178Q8N769 122 aaPredicted RBP10.47□□□□□ -0.73
KARS-201ENST00000302445 Q8N9W7 124 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
KARS-201ENST00000302445 CCDC140Q96MF4 163 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 KIR2DL4Q99706 377 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 TP53TG1Q9Y2A0 90 aa10.47□□□□□ -0.73
KARS-201ENST00000302445 RIF1Q5UIP0 2472 aaKnown RBP10.47□□□□□ -0.73
KARS-201ENST00000302445 LINC01548A6NM66 108 aa10.46□□□□□ -0.73
KARS-201ENST00000302445 IFITM1P13164 125 aa10.46□□□□□ -0.73
KARS-201ENST00000302445 LGALS3P17931 250 aaKnown RBP10.46□□□□□ -0.73
KARS-201ENST00000302445 POLR2KP53803 58 aaKnown RBP10.46□□□□□ -0.73
KARS-201ENST00000302445 PRR30Q53SZ7 412 aaPredicted RBP10.46□□□□□ -0.73
KARS-201ENST00000302445 Q6ZS46 218 aa10.46□□□□□ -0.73
KARS-201ENST00000302445 C16orf92Q96LL3 132 aa10.46□□□□□ -0.73
KARS-201ENST00000302445 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
KARS-201ENST00000302445 IGHV3OR16-8A0A075B7F1 116 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 VCYO14598 125 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 LEPROTO15243 131 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 IGHV1-69P01742 117 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 MGPP08493 103 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 OR10J6PQ8NGY7 276 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 RAX2Q96IS3 184 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 FAM19A4Q96LR4 140 aa10.46□□□□□ -0.74
KARS-201ENST00000302445 GPR179Q6PRD1 2367 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 SDHAF1A6NFY7 115 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 B5MCH6 92 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 LYNX1G3V0Z9 82 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 LYNX1P0DP58 116 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 TSPEAR-AS2P59090 65 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 TTC32Q5I0X7 151 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 DMXL1Q9Y485 3027 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 IGHV3-35A0A0C4DH35 117 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 TRBV6-5A0A0K0K1A5 114 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 TRBV30A0A0K0K1B3 111 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 LINC01620Q4KN68 170 aa10.45□□□□□ -0.74
KARS-201ENST00000302445 TRBV10-2A0A0K0K1G8 114 aa10.44□□□□□ -0.74
KARS-201ENST00000302445 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.44□□□□□ -0.74
KARS-201ENST00000302445 A4D1N5 150 aa10.44□□□□□ -0.74
KARS-201ENST00000302445 FAM90A27PA6NNH2 459 aa10.44□□□□□ -0.74
KARS-201ENST00000302445 CLEC19AQ6UXS0 136 aa10.44□□□□□ -0.74
KARS-201ENST00000302445 Q8N1Y9 231 aa10.44□□□□□ -0.74
KARS-201ENST00000302445 EP300Q09472 2414 aaPredicted RBP10.44□□□□□ -0.74
KARS-201ENST00000302445 TRBV27A0A0K0K1C4 114 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 FAM240AA0A1B0GVK7 77 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 ANXA2RQ3ZCQ2 193 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 TMEM170BQ5T4T1 132 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 CFAP161Q6P656 301 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 TRAV8-4A0A0B4J246 113 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
KARS-201ENST00000302445 LINC00315P59091 139 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 Q6ZQT7 251 aa10.43□□□□□ -0.74
KARS-201ENST00000302445 TMEM223A0PJW6 202 aa10.42□□□□□ -0.74
KARS-201ENST00000302445 RHOHQ15669 191 aa10.42□□□□□ -0.74
KARS-201ENST00000302445 ZNRF2Q8NHG8 242 aa10.42□□□□□ -0.74
KARS-201ENST00000302445 NTN5Q8WTR8 489 aaPredicted RBP10.42□□□□□ -0.74
KARS-201ENST00000302445 SPANXDQ9BXN6 97 aa10.42□□□□□ -0.74
KARS-201ENST00000302445 TRAV4A0A0B4J268 109 aa10.41□□□□□ -0.74
KARS-201ENST00000302445 H3BT86 120 aa10.41□□□□□ -0.74
KARS-201ENST00000302445 SOCS3O14543 225 aa10.41□□□□□ -0.74
KARS-201ENST00000302445 ATP6V0E1O15342 81 aa10.41□□□□□ -0.74
KARS-201ENST00000302445 ECSCRQ19T08 205 aa10.41□□□□□ -0.74
KARS-201ENST00000302445 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms