RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 H3BVH4 76 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 NXPH4O95158 308 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 MED14OSP0DP75 135 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 ASIPP42127 132 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 EMP1P54849 157 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 ZNF415Q09FC8 603 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 FAM222AQ5U5X8 452 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 Q6ZTI0 123 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 OR10AG1Q8NH19 301 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 RASL10AQ92737 203 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 PTH2Q96A98 100 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 CNFNQ9BYD5 112 aa6.74□□□□□ -1.33
RFX3-201ENST00000302303 MUC21A0A0G2JKD1 596 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 MUC21A0A140T8X8 626 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 A8MWL6 223 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 CTRLP40313 264 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 RPS20P60866 119 aaKnown RBP6.73□□□□□ -1.33
RFX3-201ENST00000302303 C12orf74Q32Q52 190 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 LYZL1Q6UWQ5 148 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 C15orf54Q8N8G6 183 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 FER1L6-AS1Q8NA97 138 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 SPXQ9BT56 116 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 JPT2Q9H910 190 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 MSRB1Q9NZV6 116 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 U3KQK5 164 aa6.73□□□□□ -1.33
RFX3-201ENST00000302303 IGHV4-4A0A075B6R2 117 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 A0A087WWC5 75 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 FAM231BA6NCW3 169 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 LYRM9A8MSI8 78 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 HIGD1CA8MV81 97 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 M0R2P5 195 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 LGALS9BQ3B8N2 356 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 ANAPC16Q96DE5 110 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 MRPL16Q9NX20 251 aaKnown RBP6.72□□□□□ -1.33
RFX3-201ENST00000302303 DNAH7Q8WXX0 4024 aa6.72□□□□□ -1.33
RFX3-201ENST00000302303 DYNC2H1Q8NCM8 4307 aaKnown RBP6.72□□□□□ -1.33
RFX3-201ENST00000302303 SNURFLB1AK76 121 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 PPP1R2P9O14990 202 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 MT-ND4LP03901 98 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 S100A4P26447 101 aaKnown RBP6.71□□□□□ -1.33
RFX3-201ENST00000302303 RHEBQ15382 184 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 UFSP1Q6NVU6 142 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 SVBPQ8N300 66 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 TMEM242Q9NWH2 141 aa6.71□□□□□ -1.33
RFX3-201ENST00000302303 A0A1W2PPQ1 181 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 XKRY2A2RUG3 117 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 F2Z2F3 143 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 EREGO14944 169 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 GAGE7O76087 117 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 CRYGDP07320 174 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 SPART-AS1P0CW21 52 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 NTF3P20783 257 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 FAM3BP58499 235 aaPredicted RBP6.71□□□□□ -1.34
RFX3-201ENST00000302303 LINC00315P59091 139 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 ZNF876PQ49A33 203 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 PIK3CD-AS1Q5SR53 167 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 WDR73Q6P4I2 378 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 PGLYRP4Q96LB8 373 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 YPEL4Q96NS1 127 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 SAMD10Q9BYL1 202 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 CTDSP1Q9GZU7 261 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 KIF25-AS1Q9Y6Z4 181 aa6.71□□□□□ -1.34
RFX3-201ENST00000302303 NACAE9PAV3 2078 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 TRGV1A0A0A0MS02 117 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 CXorf65A6NEN9 183 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 ATP6V1G1O75348 118 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 SNAPINO95295 136 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 DEFB130BP0DP73 79 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 DEFB130AP0DP74 79 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 NANOS2P60321 138 aaKnown RBP6.7□□□□□ -1.34
RFX3-201ENST00000302303 RPS10P5Q9NQ39 176 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
RFX3-201ENST00000302303 A0A1B0GXF2 115 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 M0R381 172 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 RS1O15537 224 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 HOXA5P20719 270 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 SSTP61278 116 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 Q6ZSN1 163 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 Q6ZTC4 211 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 C11orf45Q8TAV5 145 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 ZNF479Q96JC4 524 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 TPPP3Q9BW30 176 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 NAT8BQ9UHF3 227 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 CSMD3Q7Z407 3707 aa6.69□□□□□ -1.34
RFX3-201ENST00000302303 FHL2Q14192 279 aa6.68□□□□□ -1.34
RFX3-201ENST00000302303 ZFP82Q8N141 532 aa6.68□□□□□ -1.34
RFX3-201ENST00000302303 NDUFAF3Q9BU61 184 aa6.68□□□□□ -1.34
RFX3-201ENST00000302303 A0A1B0GUT8 65 aa6.67□□□□□ -1.34
RFX3-201ENST00000302303 EVI2AP22794 236 aa6.67□□□□□ -1.34
RFX3-201ENST00000302303 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms