RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 HIVEP2P31629 2446 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 FER1L6-AS1Q8NA97 138 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 ZNF688P0C7X2 276 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 CTRLP40313 264 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 PRR31Q5SQ13 230 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 PRR9Q5T870 116 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 TMEM256Q8N2U0 113 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 ZFAND2AQ8N6M9 145 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 RNF183Q96D59 192 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 TP53TG3Q9ULZ0 132 aa10.7□□□□□ -0.7
C9orf3-202ENST00000297979 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 OR10J3Q5JRS4 329 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 PSMG4Q5JS54 123 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 F5H768 121 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 TIRAPP58753 221 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 ZNF575Q86XF7 245 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 BAGE3Q86Y29 109 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 OTOGQ6ZRI0 2925 aa10.69□□□□□ -0.7
C9orf3-202ENST00000297979 IGKV3D-20A0A0C4DH25 116 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 INAFM1C9JVW0 142 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 GATD1Q8NB37 220 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 C11orf21Q9P2W6 132 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 PMCHP20382 165 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 FHL3Q13643 280 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 HSPB8Q9UJY1 196 aa10.68□□□□□ -0.7
C9orf3-202ENST00000297979 CSN3P07498 182 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 RNF114Q9Y508 228 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 CUBNO60494 3623 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 MTORP42345 2549 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 F2Z2F3 143 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 SERF1AO75920 110 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 GPX1P07203 203 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 AMTP48728 403 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 TMEM18Q96B42 140 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 RCHY1Q96PM5 261 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 NOTCH2Q04721 2471 aa10.67□□□□□ -0.7
C9orf3-202ENST00000297979 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 CCL24O00175 119 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 NUPR1O60356 82 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 LINC00310P59036 64 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 APRG1Q8IVJ8 170 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 DYNLRB2Q8TF09 96 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 Q6ZQT7 251 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 C18orf32Q8TCD1 76 aa10.66□□□□□ -0.7
C9orf3-202ENST00000297979 TRAV2A0A0B4J234 112 aa10.65□□□□□ -0.7
C9orf3-202ENST00000297979 A0A0J9YX75 114 aa10.65□□□□□ -0.7
C9orf3-202ENST00000297979 CD33P20138 364 aa10.65□□□□□ -0.7
C9orf3-202ENST00000297979 PROK1P58294 105 aa10.65□□□□□ -0.7
C9orf3-202ENST00000297979 EBLN2Q6P2I7 272 aa10.65□□□□□ -0.7
C9orf3-202ENST00000297979 ZNF493Q6ZR52 646 aa10.65□□□□□ -0.7
C9orf3-202ENST00000297979 MUC21A0A0G2JKD1 596 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 MUC21A0A140T8X8 626 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 RS1O15537 224 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 MUC21Q5SSG8 566 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 TMEM61Q8N0U2 210 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 ODF3Q96PU9 254 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 CNFNQ9BYD5 112 aa10.65□□□□□ -0.71
C9orf3-202ENST00000297979 RNASE4P34096 147 aaKnown RBP10.64□□□□□ -0.71
C9orf3-202ENST00000297979 LAMTOR2Q9Y2Q5 125 aa10.64□□□□□ -0.71
C9orf3-202ENST00000297979 KLLNB2CW77 178 aa10.64□□□□□ -0.71
C9orf3-202ENST00000297979 TWIST1Q15672 202 aa10.64□□□□□ -0.71
C9orf3-202ENST00000297979 ERG28Q9UKR5 140 aa10.64□□□□□ -0.71
C9orf3-202ENST00000297979 NTF3P20783 257 aa10.63□□□□□ -0.71
C9orf3-202ENST00000297979 DEFB114Q30KQ6 69 aa10.63□□□□□ -0.71
C9orf3-202ENST00000297979 LEPP41159 167 aa10.63□□□□□ -0.71
C9orf3-202ENST00000297979 KIR3DS1Q14943 382 aa10.63□□□□□ -0.71
C9orf3-202ENST00000297979 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
C9orf3-202ENST00000297979 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
C9orf3-202ENST00000297979 NF1P21359 2839 aa10.63□□□□□ -0.71
C9orf3-202ENST00000297979 A0A087WX48 190 aa10.62□□□□□ -0.71
C9orf3-202ENST00000297979 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
C9orf3-202ENST00000297979 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
C9orf3-202ENST00000297979 OR5AL1P0C617 328 aa10.61□□□□□ -0.71
C9orf3-202ENST00000297979 CD300EQ496F6 205 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-202ENST00000297979 SAMD10Q9BYL1 202 aa10.61□□□□□ -0.71
C9orf3-202ENST00000297979 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
C9orf3-202ENST00000297979 ANXA2RQ3ZCQ2 193 aa10.61□□□□□ -0.71
C9orf3-202ENST00000297979 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
C9orf3-202ENST00000297979 A0A0U1RRA0 63 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 IGKV3-20P01619 116 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 DEFB131AP59861 70 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 AMN1Q8IY45 258 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 SPAG8Q99932 426 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-202ENST00000297979 SIGLEC8Q9NYZ4 499 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 C7orf71A4D174 169 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 ADARB2-AS1A8MUL3 147 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 H3BVH4 76 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
C9orf3-202ENST00000297979 CRLF1O75462 422 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 TSPOP30536 169 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 ASIPP42127 132 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 MRAPQ8TCY5 172 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 OR4C46A6NHA9 309 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 CACNG7P62955 275 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 HSD52Q0P140 79 aa10.59□□□□□ -0.71
C9orf3-202ENST00000297979 KIR2DL5BQ8NHK3 375 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms