RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RPL7P18124 248 aaKnown RBP11.96□□□□□ -0.49
UBAP1-201ENST00000297661 PDE6HQ13956 83 aa11.96□□□□□ -0.49
UBAP1-201ENST00000297661 SFTA2Q6UW10 78 aa11.96□□□□□ -0.49
UBAP1-201ENST00000297661 A0A087WX48 190 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 CLEC3BP05452 202 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 Q8N6K4 173 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 Q8N9W7 124 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 ANAPC13Q9BS18 74 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 PSMB2P49721 201 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 IGHV3OR16-10A0A075B7F0 116 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 COX8CQ7Z4L0 72 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 UBTD1Q9HAC8 227 aa11.95□□□□□ -0.5
UBAP1-201ENST00000297661 LOC107984156A0A0G2JMH3 177 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 MYMXA0A1B0GTQ4 84 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 PRSS29PA6NIE9 313 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 ATP6V0E1O15342 81 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 ARL17AQ8IVW1 177 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 LINC01549A6NIU2 74 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 LINC01619G3V211 115 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 COX6B1P14854 86 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 PLNP26678 52 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 DTX2Q86UW9 622 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 CNFNQ9BYD5 112 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 LINC00527Q9UJ94 153 aa11.94□□□□□ -0.5
UBAP1-201ENST00000297661 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
UBAP1-201ENST00000297661 PPDPFLQ8WWR9 84 aa11.93□□□□□ -0.5
UBAP1-201ENST00000297661 EFNA4P52798 201 aa11.93□□□□□ -0.5
UBAP1-201ENST00000297661 CLEC19AQ6UXS0 136 aa11.93□□□□□ -0.5
UBAP1-201ENST00000297661 ZFP2Q6ZN57 461 aa11.93□□□□□ -0.5
UBAP1-201ENST00000297661 Q6ZQT7 251 aa11.93□□□□□ -0.5
UBAP1-201ENST00000297661 LAGE3Q14657 143 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 SAA4P35542 130 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 GAGE5Q13069 117 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 GAGE6Q13070 117 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 IL17RELQ6ZVW7 336 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 TMEM219Q86XT9 240 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 NAV2Q8IVL1 2488 aa11.92□□□□□ -0.5
UBAP1-201ENST00000297661 CFAP161Q6P656 301 aa11.91□□□□□ -0.5
UBAP1-201ENST00000297661 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
UBAP1-201ENST00000297661 SIRPDQ9H106 197 aa11.91□□□□□ -0.5
UBAP1-201ENST00000297661 LGALS1P09382 135 aaKnown RBP11.91□□□□□ -0.5
UBAP1-201ENST00000297661 ANKRD17O75179 2603 aaKnown RBP11.9□□□□□ -0.5
UBAP1-201ENST00000297661 AJUBAQ96IF1 538 aa11.9□□□□□ -0.5
UBAP1-201ENST00000297661 B5MCH6 92 aa11.9□□□□□ -0.5
UBAP1-201ENST00000297661 F8VRH5 84 aa11.9□□□□□ -0.5
UBAP1-201ENST00000297661 ZFAND6Q6FIF0 208 aa11.9□□□□□ -0.5
UBAP1-201ENST00000297661 UFC1Q9Y3C8 167 aa11.9□□□□□ -0.5
UBAP1-201ENST00000297661 H7C1H1 209 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 EBI3Q14213 229 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 BPESC1Q9GZL8 116 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 TRGV3P03979 118 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
UBAP1-201ENST00000297661 A6NJY4 79 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 MINOS1Q5TGZ0 78 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 MINOS1-NBL1R4GNA1 71 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 FABP5P3A8MUU1 101 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 J3KRW8 73 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 BUB3O43684 328 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 UBE2D3P61077 147 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 UBE2D2P62837 147 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 CLPSL1A2RUU4 121 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 UBE2D1P51668 147 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 SRSF2Q01130 221 aaKnown RBP11.88□□□□□ -0.51
UBAP1-201ENST00000297661 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 NRACQ8N912 160 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 KIR2DL4Q99706 377 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 VCX2Q9H322 139 aa11.88□□□□□ -0.51
UBAP1-201ENST00000297661 C1orf122Q6ZSJ8 110 aa11.87□□□□□ -0.51
UBAP1-201ENST00000297661 C11orf21Q9P2W6 132 aa11.87□□□□□ -0.51
UBAP1-201ENST00000297661 SPRY2O43597 315 aa11.87□□□□□ -0.51
UBAP1-201ENST00000297661 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBAP1-201ENST00000297661 SCGB1D4Q6XE38 83 aa11.87□□□□□ -0.51
UBAP1-201ENST00000297661 FAM110DQ8TAY7 271 aaPredicted RBP11.87□□□□□ -0.51
UBAP1-201ENST00000297661 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 KLK15Q9H2R5 256 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 ABCA2Q9BZC7 2435 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 H3BVH4 76 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 SCGB2A1O75556 95 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 TCL1BO95988 128 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 PRADC1Q9BSG0 188 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 AGPAT4-IT1Q9H0P7 198 aa11.86□□□□□ -0.51
UBAP1-201ENST00000297661 A8MWV9 139 aa11.85□□□□□ -0.51
UBAP1-201ENST00000297661 NHLRC4P0CG21 123 aaPredicted RBP11.85□□□□□ -0.51
UBAP1-201ENST00000297661 UBE2E1P51965 193 aa11.85□□□□□ -0.51
UBAP1-201ENST00000297661 DEFB1P60022 68 aa11.85□□□□□ -0.51
UBAP1-201ENST00000297661 PLEKHB2Q96CS7 222 aa11.85□□□□□ -0.51
UBAP1-201ENST00000297661 ZNF469Q96JG9 3925 aaPredicted RBP11.85□□□□□ -0.51
UBAP1-201ENST00000297661 IGKV3D-20A0A0C4DH25 116 aa11.85□□□□□ -0.51
UBAP1-201ENST00000297661 LYRM7Q5U5X0 104 aa11.85□□□□□ -0.51
UBAP1-201ENST00000297661 TGFAP01135 160 aa11.84□□□□□ -0.51
UBAP1-201ENST00000297661 BRD3OSQ6XYD6 125 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms