RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 HES1Q14469 280 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 LAGE3Q14657 143 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 DYNAPQ8N1N2 210 aa7.97□□□□□ -1.13
SKA1-201ENST00000285116 DLX4Q92988 240 aaPredicted RBP7.97□□□□□ -1.13
SKA1-201ENST00000285116 MYMXA0A1B0GTQ4 84 aa7.96□□□□□ -1.13
SKA1-201ENST00000285116 MORN3Q6PF18 240 aaPredicted RBP7.96□□□□□ -1.13
SKA1-201ENST00000285116 DTX2Q86UW9 622 aa7.96□□□□□ -1.13
SKA1-201ENST00000285116 Q8TAT8 98 aa7.96□□□□□ -1.13
SKA1-201ENST00000285116 SIRPDQ9H106 197 aa7.96□□□□□ -1.13
SKA1-201ENST00000285116 U3KQE9 123 aa7.96□□□□□ -1.13
SKA1-201ENST00000285116 NIPBLQ6KC79 2804 aaeCLIP7.96□□□□□ -1.13
SKA1-201ENST00000285116 GATA1P15976 413 aaPredicted RBP7.96□□□□□ -1.14
SKA1-201ENST00000285116 LENEPQ9Y5L5 61 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 S4R3C0 116 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 CLPSL1A2RUU4 121 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 OR11H12B2RN74 326 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 C9orf47Q6ZRZ4 202 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 OR11H1Q8NG94 326 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 OR11H2Q8NH07 326 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 VCX2Q9H322 139 aa7.96□□□□□ -1.14
SKA1-201ENST00000285116 FLNAP21333 2647 aaKnown RBP7.95□□□□□ -1.14
SKA1-201ENST00000285116 TSPAN13O95857 204 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 PPIFP30405 207 aaKnown RBP7.95□□□□□ -1.14
SKA1-201ENST00000285116 SMCPP49901 116 aaPredicted RBP7.95□□□□□ -1.14
SKA1-201ENST00000285116 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 AJUBAQ96IF1 538 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 TRAV12-1A0A0B4J245 112 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 F8VRH5 84 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 H7C1H1 209 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 Q6ZUT4 128 aa7.95□□□□□ -1.14
SKA1-201ENST00000285116 C19orf84I3L1E1 186 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 NRACQ8N912 160 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 UNC79Q9P2D8 2635 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 TRBV7-1A0A0A6YYK4 115 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 IGKV3D-20A0A0C4DH25 116 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 IGHV7-4-1A0A0J9YVY3 117 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 HLA-DMBP28068 263 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 NFE4Q86UQ8 179 aa7.94□□□□□ -1.14
SKA1-201ENST00000285116 UBR5O95071 2799 aaPredicted RBP7.94□□□□□ -1.14
SKA1-201ENST00000285116 UBE2E1P51965 193 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 CRIP2P52943 208 aaPredicted RBP7.93□□□□□ -1.14
SKA1-201ENST00000285116 ERG28Q9UKR5 140 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 MXRA5Q9NR99 2828 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 TRAV8-2A0A0B4J237 113 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 CENPVL3A0A0U1RRI6 287 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 PRAC2D3DTV9 90 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 XGP55808 180 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 C15orf32Q32M92 178 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 LYRM7Q5U5X0 104 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 PPDPFLQ8WWR9 84 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 CCDC140Q96MF4 163 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 AGPAT4-IT1Q9H0P7 198 aa7.93□□□□□ -1.14
SKA1-201ENST00000285116 LGALS1P09382 135 aaKnown RBP7.92□□□□□ -1.14
SKA1-201ENST00000285116 IGHV3-23P01764 117 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 SLC25A16P16260 332 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 KLRB1Q12918 225 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 ERCC8Q13216 396 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 C19orf54Q5BKX5 351 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 EEF1AKMT3Q96AZ1 226 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 C11orf21Q9P2W6 132 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 LINC01549A6NIU2 74 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 BRI3O95415 125 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 MED14OSP0DP75 135 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 PSMB2P49721 201 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 EFNA4P52798 201 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 FHL3Q13643 280 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 TEN1Q86WV5 123 aa7.92□□□□□ -1.14
SKA1-201ENST00000285116 UBE2D1P51668 147 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 UBE2D3P61077 147 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 UBE2D2P62837 147 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 TMEM78Q5T7P6 136 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 TRGV3P03979 118 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 ADORA2A-AS1P86434 159 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 IGFL4Q6B9Z1 124 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 GLMPQ8WWB7 406 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 RNF183Q96D59 192 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 METTL26Q96S19 204 aa7.91□□□□□ -1.14
SKA1-201ENST00000285116 LOC107984156A0A0G2JMH3 177 aa7.9□□□□□ -1.14
SKA1-201ENST00000285116 CLEC3BP05452 202 aa7.9□□□□□ -1.14
SKA1-201ENST00000285116 ZFP36P26651 326 aaKnown RBP7.9□□□□□ -1.14
SKA1-201ENST00000285116 ARL17AQ8IVW1 177 aa7.9□□□□□ -1.14
SKA1-201ENST00000285116 ITLN2Q8WWU7 325 aaPredicted RBP7.9□□□□□ -1.14
SKA1-201ENST00000285116 TRBV7-9A0A0J9YWB2 115 aa7.9□□□□□ -1.15
SKA1-201ENST00000285116 ATP6V0E1O15342 81 aa7.9□□□□□ -1.15
SKA1-201ENST00000285116 C9orf139Q6ZV77 190 aa7.9□□□□□ -1.15
SKA1-201ENST00000285116 CARD19Q96LW7 228 aa7.9□□□□□ -1.15
SKA1-201ENST00000285116 FAM223BA6NKX1 122 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 ORMDL2Q53FV1 153 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 FAM223AQ8IWN6 122 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 SCGB3A1Q96QR1 104 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 PRORYQ9H606 182 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 NOTCH3Q9UM47 2321 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 TRBV20-1A0A075B6N2 111 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 TRAV26-2A0A0B4J265 109 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 A0A1W2PPR1 153 aa7.89□□□□□ -1.15
SKA1-201ENST00000285116 M0R381 172 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms