RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MUC4Q99102 2169 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 MYO18AQ92614 2054 aaKnown RBP1.84□□□□□ -2.11
CHD1-201ENST00000284049 M0R378 163 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 CLECL1Q8IZS7 167 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 LINC00467Q9BRT7 94 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 TAS2R4Q9NYW5 299 aa1.84□□□□□ -2.11
CHD1-201ENST00000284049 SPTY2D1-AS1A0A0U1RR47 76 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 FUSP35637 526 aaKnown RBP eCLIP1.84□□□□□ -2.12
CHD1-201ENST00000284049 TP53TG3Q9ULZ0 132 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 LINC00588Q9Y4M8 146 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 MDC1Q14676 2089 aaKnown RBP1.84□□□□□ -2.12
CHD1-201ENST00000284049 HEATR1Q9H583 2144 aaKnown RBP1.84□□□□□ -2.12
CHD1-201ENST00000284049 TRAV3A0A0B4J244 114 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 LECT2O14960 151 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 FSTL3O95633 263 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 SPINT3P49223 89 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 S100A10P60903 97 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 SPANXN5Q5MJ07 72 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 ZFAND2AQ8N6M9 145 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 NDUFB11Q9NX14 153 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 PTPRBP23467 1997 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 IGLV3-32A0A0A0MS00 114 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 M0R129 80 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 C9orf153Q5TBE3 101 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 AQP3Q92482 292 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 TMEM242Q9NWH2 141 aa1.84□□□□□ -2.12
CHD1-201ENST00000284049 DNAH12Q6ZR08 3092 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 JMJD1CQ15652 2540 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 CEP250Q9BV73 2442 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 CFAP46Q8IYW2 2715 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 IGHV3-64A0A075B6Q5 118 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 IGHV1-24A0A0C4DH33 117 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 KLF7O75840 302 aaPredicted RBP1.83□□□□□ -2.12
CHD1-201ENST00000284049 UBL3O95164 117 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 GYPBP06028 91 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 TMEM14EPQ6UXP3 125 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 PHF5AQ7RTV0 110 aaKnown RBP1.83□□□□□ -2.12
CHD1-201ENST00000284049 THADAQ6YHU6 1953 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 REV3LO60673 3130 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 PTPRZ1P23471 2315 aaPredicted RBP1.83□□□□□ -2.12
CHD1-201ENST00000284049 IGLC6P0CF74 106 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 CGB3P0DN86 165 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 CGB7P0DN87 165 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 XCL1P47992 114 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 BLCAPP62952 87 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 LY6EQ16553 131 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 FAM74A1Q5RGS3 127 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 UBALD1Q8TB05 177 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 SNHG12Q9BXW3 62 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 RABAC1Q9UI14 185 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 FN1P02751 2386 aaKnown RBP1.83□□□□□ -2.12
CHD1-201ENST00000284049 IGKV3D-11A0A0A0MRZ8 115 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 CCL3P10147 92 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 OR5AS1Q8N127 324 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 TM2D3Q9BRN9 247 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 COMMD3Q9UBI1 195 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 FAM186AA6NE01 2351 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 TRAV1-1A0A0B4J248 108 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 TRAV17A0A0B4J275 112 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 TCRAP04437 139 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 C12orf73Q69YU5 71 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 UTRNP46939 3433 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 DSCAML1Q8TD84 2053 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 MYOFQ9NZM1 2061 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 GPR179Q6PRD1 2367 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 HYPMO75409 117 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 SLC25A5P05141 298 aaKnown RBP1.83□□□□□ -2.12
CHD1-201ENST00000284049 DIAPH2-AS1Q14236 149 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 Q6AWC8 147 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 ZC2HC1AQ96GY0 325 aa1.83□□□□□ -2.12
CHD1-201ENST00000284049 PCNX2A6NKB5 2137 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 TRPM6Q9BX84 2022 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 FAM236AA0A1B0GUQ0 79 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 FAM236BA0A1B0GV22 79 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 MDFIC2A0A1B0GVS7 189 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 HCRTO43612 131 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 SSSCA1O60232 199 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 BAALC-AS2P0C853 105 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 UBA52P62987 128 aaKnown RBP1.82□□□□□ -2.12
CHD1-201ENST00000284049 ASB16-AS1Q495Z4 193 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 CCL26Q9Y258 94 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 KLK5Q9Y337 293 aaPredicted RBP1.82□□□□□ -2.12
CHD1-201ENST00000284049 CNTRLQ7Z7A1 2325 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 H3BQ15 152 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 IL5P05113 134 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 DEFA4P12838 97 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 C7orf65Q6ZTY9 151 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 J3QLW9 94 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 Q8N9P0 234 aaPredicted RBP1.82□□□□□ -2.12
CHD1-201ENST00000284049 SLC35B3Q9H1N7 401 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 PCNX3Q9H6A9 2034 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 AKAP6Q13023 2319 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 SAA1P0DJI8 122 aaPredicted RBP1.82□□□□□ -2.12
CHD1-201ENST00000284049 HLA-DRB4P13762 266 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 HLA-DRB4X5D2U9 266 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 PRR14LQ5THK1 2151 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 AGRNO00468 2067 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 ITPR1Q14643 2758 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 ZNF670-ZNF695F2Z2N8 137 aa1.82□□□□□ -2.12
CHD1-201ENST00000284049 SLC25A4P12235 298 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms