RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 GNRH2O43555 120 aa14.16□□□□□ -0.14
SSC4D-201ENST00000275560 Q6ZS46 218 aa14.16□□□□□ -0.14
SSC4D-201ENST00000275560 MUC4Q99102 2169 aa14.15□□□□□ -0.14
SSC4D-201ENST00000275560 F6UB75 175 aa14.15□□□□□ -0.14
SSC4D-201ENST00000275560 SPINK8P0C7L1 97 aa14.15□□□□□ -0.14
SSC4D-201ENST00000275560 XGP55808 180 aa14.15□□□□□ -0.14
SSC4D-201ENST00000275560 TIMD4Q96H15 378 aa14.15□□□□□ -0.14
SSC4D-201ENST00000275560 CARD19Q96LW7 228 aa14.15□□□□□ -0.14
SSC4D-201ENST00000275560 GEMIN7Q9H840 131 aaKnown RBP14.15□□□□□ -0.14
SSC4D-201ENST00000275560 C11orf86A6NJI1 115 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 CRYGDP07320 174 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 COX6B1P14854 86 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 PHLDA3Q9Y5J5 127 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 UBE2D1P51668 147 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 ANXA2RQ3ZCQ2 193 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 ARL3P36405 182 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 EBI3Q14213 229 aa14.14□□□□□ -0.15
SSC4D-201ENST00000275560 SPTAN1Q13813 2472 aaKnown RBP14.13□□□□□ -0.15
SSC4D-201ENST00000275560 KIR2DL4Q99706 377 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 LINC01619G3V211 115 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 TCL1BO95988 128 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 TSHBP01222 138 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 CD7P09564 240 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 CRYBA4P53673 196 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 TSPEAR-AS2P59090 65 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 RPL39P62891 51 aaKnown RBP14.13□□□□□ -0.15
SSC4D-201ENST00000275560 ZFAND2AQ8N6M9 145 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 DPH3P1Q9H4G8 78 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 JPT2Q9H910 190 aa14.13□□□□□ -0.15
SSC4D-201ENST00000275560 RNASE4P34096 147 aaKnown RBP14.12□□□□□ -0.15
SSC4D-201ENST00000275560 TCTEX1D4Q5JR98 221 aa14.12□□□□□ -0.15
SSC4D-201ENST00000275560 TMEM219Q86XT9 240 aa14.12□□□□□ -0.15
SSC4D-201ENST00000275560 PTPRQQ9UMZ3 2332 aa14.12□□□□□ -0.15
SSC4D-201ENST00000275560 UNQ9165/PRO28630Q6UXU0 137 aa14.11□□□□□ -0.15
SSC4D-201ENST00000275560 COL6A6A6NMZ7 2263 aa14.11□□□□□ -0.15
SSC4D-201ENST00000275560 TRBV12-3P01733 135 aa14.11□□□□□ -0.15
SSC4D-201ENST00000275560 IGLV4-69A0A075B6H9 119 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 Q6ZUT4 128 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 TP53TG1Q9Y2A0 90 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 TMEM238LA0A1B0GVL6 79 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 A6NJY4 79 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 NDUFA11Q86Y39 141 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 GPHB5Q86YW7 130 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 EEF1AKMT3Q96AZ1 226 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 AJUBAQ96IF1 538 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 ASIPP42127 132 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 UBE2D3P61077 147 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 UBE2D2P62837 147 aa14.1□□□□□ -0.15
SSC4D-201ENST00000275560 A0A0J9YY99 117 aa14.09□□□□□ -0.15
SSC4D-201ENST00000275560 GATA3P23771 443 aa14.09□□□□□ -0.15
SSC4D-201ENST00000275560 RPL11P62913 178 aaKnown RBP14.09□□□□□ -0.15
SSC4D-201ENST00000275560 SAA4P35542 130 aa14.09□□□□□ -0.15
SSC4D-201ENST00000275560 CRYBG3Q68DQ2 2970 aa14.09□□□□□ -0.15
SSC4D-201ENST00000275560 CFC1BP0CG36 223 aa14.08□□□□□ -0.16
SSC4D-201ENST00000275560 CFC1P0CG37 223 aa14.08□□□□□ -0.16
SSC4D-201ENST00000275560 ITLN2Q8WWU7 325 aaPredicted RBP14.08□□□□□ -0.16
SSC4D-201ENST00000275560 IGHV3OR16-10A0A075B7F0 116 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 RNASE3P12724 160 aaKnown RBP14.07□□□□□ -0.16
SSC4D-201ENST00000275560 TMEM170BQ5T4T1 132 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 MRPL53Q96EL3 112 aaKnown RBP14.07□□□□□ -0.16
SSC4D-201ENST00000275560 U3KQE9 123 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 A0A087WWL8 130 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 CCL21O00585 134 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 MINOS1Q5TGZ0 78 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 MINOS1-NBL1R4GNA1 71 aa14.07□□□□□ -0.16
SSC4D-201ENST00000275560 TRAV21A0A0B4J279 112 aa14.06□□□□□ -0.16
SSC4D-201ENST00000275560 SRD5A1P18405 259 aa14.06□□□□□ -0.16
SSC4D-201ENST00000275560 ATP6V0E2Q8NHE4 81 aa14.06□□□□□ -0.16
SSC4D-201ENST00000275560 RAX2Q96IS3 184 aa14.06□□□□□ -0.16
SSC4D-201ENST00000275560 SIRPDQ9H106 197 aa14.06□□□□□ -0.16
SSC4D-201ENST00000275560 H7C2G1 150 aa14.06□□□□□ -0.16
SSC4D-201ENST00000275560 OR10J6PQ8NGY7 276 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 OPRPNQ99935 248 aaPredicted RBP14.05□□□□□ -0.16
SSC4D-201ENST00000275560 SCGB1C2P0DMR2 95 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 CRIP2P52943 208 aaPredicted RBP14.05□□□□□ -0.16
SSC4D-201ENST00000275560 TEN1Q86WV5 123 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 ANKRD29Q8N6D5 301 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 ZNRF2Q8NHG8 242 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 IGHV3-64A0A075B6Q5 118 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 OOSP1A8MZH6 123 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 PPDPFLQ8WWR9 84 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 RNF183Q96D59 192 aa14.05□□□□□ -0.16
SSC4D-201ENST00000275560 IGHV3-30P01768 117 aa14.04□□□□□ -0.16
SSC4D-201ENST00000275560 IGHV3-30-5P0DP03 117 aa14.04□□□□□ -0.16
SSC4D-201ENST00000275560 C9orf139Q6ZV77 190 aa14.04□□□□□ -0.16
SSC4D-201ENST00000275560 TRBV7-1A0A0A6YYK4 115 aa14.04□□□□□ -0.16
SSC4D-201ENST00000275560 CENPVL3A0A0U1RRI6 287 aa14.03□□□□□ -0.16
SSC4D-201ENST00000275560 IGHV3-11P01762 117 aa14.03□□□□□ -0.16
SSC4D-201ENST00000275560 TRPT1Q86TN4 253 aaKnown RBP14.03□□□□□ -0.16
SSC4D-201ENST00000275560 IGF2RP11717 2491 aa14.03□□□□□ -0.16
SSC4D-201ENST00000275560 IGIPA6NJ69 53 aa14.03□□□□□ -0.16
SSC4D-201ENST00000275560 F5H697 171 aa14.02□□□□□ -0.16
SSC4D-201ENST00000275560 EIF4EBP3O60516 100 aaPredicted RBP14.02□□□□□ -0.16
SSC4D-201ENST00000275560 LINC00315P59091 139 aa14.02□□□□□ -0.16
SSC4D-201ENST00000275560 LINC00477Q96M19 166 aa14.02□□□□□ -0.16
SSC4D-201ENST00000275560 C11orf71Q6IPW1 123 aa14.02□□□□□ -0.17
SSC4D-201ENST00000275560 EDN2P20800 178 aa14.01□□□□□ -0.17
SSC4D-201ENST00000275560 A8MWV9 139 aa14.01□□□□□ -0.17
SSC4D-201ENST00000275560 PMVKQ15126 192 aa14.01□□□□□ -0.17
SSC4D-201ENST00000275560 SUMO4Q6EEV6 95 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms