RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 LYZL1Q6UWQ5 148 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 AMTNQ6UX39 209 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 FER1L6-AS1Q8NA97 138 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 GATD1Q8NB37 220 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 LAMTOR2Q9Y2Q5 125 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 CBY1Q9Y3M2 126 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
TRIM23-202ENST00000274327 PF4P02776 101 aa10.77□□□□□ -0.68
TRIM23-202ENST00000274327 OR5AL1P0C617 328 aa10.77□□□□□ -0.68
TRIM23-202ENST00000274327 RNASE4P34096 147 aaKnown RBP10.77□□□□□ -0.68
TRIM23-202ENST00000274327 CAMPP49913 170 aa10.77□□□□□ -0.68
TRIM23-202ENST00000274327 RIGQ13278 110 aa10.77□□□□□ -0.68
TRIM23-202ENST00000274327 Q6ZN92 141 aa10.77□□□□□ -0.68
TRIM23-202ENST00000274327 KNCNA6PVL3 124 aa10.77□□□□□ -0.69
TRIM23-202ENST00000274327 KIAA1644Q3SXP7 199 aa10.77□□□□□ -0.69
TRIM23-202ENST00000274327 A0A1B0GW15 77 aa10.76□□□□□ -0.69
TRIM23-202ENST00000274327 H3BMM0 161 aa10.76□□□□□ -0.69
TRIM23-202ENST00000274327 M0R2Z0 102 aa10.76□□□□□ -0.69
TRIM23-202ENST00000274327 ODF3L2Q3SX64 289 aa10.76□□□□□ -0.69
TRIM23-202ENST00000274327 CNFNQ9BYD5 112 aa10.76□□□□□ -0.69
TRIM23-202ENST00000274327 C7orf71A4D174 169 aa10.75□□□□□ -0.69
TRIM23-202ENST00000274327 IGKV3-20P01619 116 aa10.75□□□□□ -0.69
TRIM23-202ENST00000274327 TSPOP30536 169 aa10.75□□□□□ -0.69
TRIM23-202ENST00000274327 TPPP3Q9BW30 176 aa10.75□□□□□ -0.69
TRIM23-202ENST00000274327 ST20Q9HBF5 79 aa10.75□□□□□ -0.69
TRIM23-202ENST00000274327 CDKN1BP46527 198 aa10.74□□□□□ -0.69
TRIM23-202ENST00000274327 SSBP4Q9BWG4 385 aaPredicted RBP10.74□□□□□ -0.69
TRIM23-202ENST00000274327 RBMY1BA6NDE4 496 aaKnown RBP10.74□□□□□ -0.69
TRIM23-202ENST00000274327 RBMY1EA6NEQ0 496 aaKnown RBP10.74□□□□□ -0.69
TRIM23-202ENST00000274327 SNAI2O43623 268 aa10.74□□□□□ -0.69
TRIM23-202ENST00000274327 RBMY1DP0C7P1 496 aaKnown RBP10.74□□□□□ -0.69
TRIM23-202ENST00000274327 NTF3P20783 257 aa10.74□□□□□ -0.69
TRIM23-202ENST00000274327 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
TRIM23-202ENST00000274327 TMEM70Q9BUB7 260 aa10.74□□□□□ -0.69
TRIM23-202ENST00000274327 NPSP0C0P6 89 aa10.73□□□□□ -0.69
TRIM23-202ENST00000274327 SPINK13Q1W4C9 94 aa10.73□□□□□ -0.69
TRIM23-202ENST00000274327 BEAN1Q3B7T3 259 aa10.73□□□□□ -0.69
TRIM23-202ENST00000274327 KRTAP24-1Q3LI83 254 aa10.73□□□□□ -0.69
TRIM23-202ENST00000274327 ZNF493Q6ZR52 646 aa10.73□□□□□ -0.69
TRIM23-202ENST00000274327 CLUHP3Q96NS8 147 aa10.73□□□□□ -0.69
TRIM23-202ENST00000274327 CMC4P56277 68 aaPredicted RBP10.72□□□□□ -0.69
TRIM23-202ENST00000274327 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 TRAV12-2A0A075B6T6 113 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 TRAV12-3A0A0B4J271 114 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 OR11H12B2RN74 326 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 MED14OSP0DP75 135 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 BATFQ16520 125 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 MUC21Q5SSG8 566 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 FAM110AQ9BQ89 295 aa10.72□□□□□ -0.69
TRIM23-202ENST00000274327 JMJD1CQ15652 2540 aa10.71□□□□□ -0.69
TRIM23-202ENST00000274327 MUC21A0A0G2JKD1 596 aa10.71□□□□□ -0.69
TRIM23-202ENST00000274327 MUC21A0A140T8X8 626 aa10.71□□□□□ -0.69
TRIM23-202ENST00000274327 RNASEKQ6P5S7 137 aaKnown RBP10.71□□□□□ -0.69
TRIM23-202ENST00000274327 IGHV4-4A0A075B6R2 117 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 PRR31Q5SQ13 230 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 PET117Q6UWS5 81 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 STPG4Q8N801 248 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 H3BVH4 76 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 ASIPP42127 132 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 SPATA3Q8NHX4 192 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 TMEM191AQ9H0A3 160 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 C19orf73Q9NVV2 129 aa10.7□□□□□ -0.7
TRIM23-202ENST00000274327 NIPBLQ6KC79 2804 aaeCLIP10.69□□□□□ -0.7
TRIM23-202ENST00000274327 LOC102724200A0A096LPH7 203 aaPredicted RBP10.69□□□□□ -0.7
TRIM23-202ENST00000274327 GNRH2O43555 120 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 INSL3P51460 131 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 FXYD7P58549 80 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 CACNG7P62955 275 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 TWIST1Q15672 202 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 PRIMA1Q86XR5 153 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 OR10AG1Q8NH19 301 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 MSRB1Q9NZV6 116 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 HSPB8Q9UJY1 196 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
TRIM23-202ENST00000274327 SYS1-DBNDD2H3BUS1 97 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 RBMY1A1P0DJD3 496 aaKnown RBP10.68□□□□□ -0.7
TRIM23-202ENST00000274327 RBMY1CP0DJD4 496 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 RNASE3P12724 160 aaKnown RBP10.68□□□□□ -0.7
TRIM23-202ENST00000274327 RBMY1FQ15415 496 aaKnown RBP10.68□□□□□ -0.7
TRIM23-202ENST00000274327 C9orf66Q5T8R8 295 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
TRIM23-202ENST00000274327 IGHV1OR15-1A0A075B7D0 117 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 HSBP1L1C9JCN9 74 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 CD7P09564 240 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 IGLL1P15814 213 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 FAM104BQ5XKR9 115 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 ZNF747Q9BV97 191 aa10.68□□□□□ -0.7
TRIM23-202ENST00000274327 TEP1Q99973 2627 aaKnown RBP10.67□□□□□ -0.7
TRIM23-202ENST00000274327 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
TRIM23-202ENST00000274327 UBE2V1Q13404 147 aa10.67□□□□□ -0.7
TRIM23-202ENST00000274327 SPATA12Q7Z6I5 190 aa10.67□□□□□ -0.7
TRIM23-202ENST00000274327 STHQ8IWL8 128 aa10.67□□□□□ -0.7
TRIM23-202ENST00000274327 URB1-AS1Q96HZ7 61 aa10.67□□□□□ -0.7
TRIM23-202ENST00000274327 PMCHL2Q9BQD1 86 aa10.67□□□□□ -0.7
TRIM23-202ENST00000274327 MAP1LC3CQ9BXW4 147 aa10.67□□□□□ -0.7
TRIM23-202ENST00000274327 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
TRIM23-202ENST00000274327 C12orf54Q6X4T0 127 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms