RNA–Protein interactions for RNA: ENST00000269967.3

CCDC97-201, Transcript of coiled-coil domain containing 97, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC97, Length 3,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97-201ENST00000269967 NDUFA4O00483 81 aa10.1□□□□□ -0.79
CCDC97-201ENST00000269967 CRXO43186 299 aaPredicted RBP10.1□□□□□ -0.79
CCDC97-201ENST00000269967 IGHG2P01859 326 aa10.1□□□□□ -0.79
CCDC97-201ENST00000269967 LINC01559Q495D7 138 aa10.1□□□□□ -0.79
CCDC97-201ENST00000269967 A0A1W2PRX2 142 aa10.09□□□□□ -0.79
CCDC97-201ENST00000269967 NXT2Q9NPJ8 142 aaKnown RBP10.09□□□□□ -0.79
CCDC97-201ENST00000269967 H3BUT2 72 aa10.09□□□□□ -0.79
CCDC97-201ENST00000269967 PPBPP02775 128 aa10.09□□□□□ -0.79
CCDC97-201ENST00000269967 PRM2P04554 102 aa10.09□□□□□ -0.79
CCDC97-201ENST00000269967 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
CCDC97-201ENST00000269967 TMEM97Q5BJF2 176 aa10.09□□□□□ -0.79
CCDC97-201ENST00000269967 COX8AP10176 69 aa10.08□□□□□ -0.8
CCDC97-201ENST00000269967 SFTA2Q6UW10 78 aa10.08□□□□□ -0.8
CCDC97-201ENST00000269967 TMEM238LA0A1B0GVL6 79 aa10.08□□□□□ -0.8
CCDC97-201ENST00000269967 USMG5Q96IX5 58 aa10.08□□□□□ -0.8
CCDC97-201ENST00000269967 BBC3Q96PG8 261 aaPredicted RBP10.08□□□□□ -0.8
CCDC97-201ENST00000269967 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
CCDC97-201ENST00000269967 IGHV3OR16-12A0A075B7B8 117 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 IGKV2D-26A0A0A0MRZ7 120 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 IGHV7-4-1A0A0J9YVY3 117 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 A6NDX4 124 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 LAGE3Q14657 143 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 GPHB5Q86YW7 130 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 NIPBLQ6KC79 2804 aaeCLIP10.07□□□□□ -0.8
CCDC97-201ENST00000269967 HOXA3O43365 443 aaPredicted RBP10.07□□□□□ -0.8
CCDC97-201ENST00000269967 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 ZNF575Q86XF7 245 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 MS4A6AQ9H2W1 248 aa10.07□□□□□ -0.8
CCDC97-201ENST00000269967 NDUFS8O00217 210 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 CD5LO43866 347 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 IGKCP01834 107 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 ZNF56Q15929 161 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 ZFAND2AQ8N6M9 145 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 TMEM190Q8WZ59 177 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 MEGF9Q9H1U4 602 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 ID1P41134 155 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 DPF1Q92782 380 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 JMJD8Q96S16 334 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 SMPXQ9UHP9 88 aa10.06□□□□□ -0.8
CCDC97-201ENST00000269967 HELZ2Q9BYK8 2649 aaKnown RBP10.06□□□□□ -0.8
CCDC97-201ENST00000269967 OVOL1O14753 267 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
CCDC97-201ENST00000269967 SRSF1Q07955 248 aaKnown RBP eCLIP10.05□□□□□ -0.8
CCDC97-201ENST00000269967 UBE2V1Q13404 147 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 C18orf65Q6ZTR6 163 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 CSTL1Q9H114 145 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 RBAKDNA6NC62 111 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 KNCNA6PVL3 124 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 LGALS9BQ3B8N2 356 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 LGALS9CQ6DKI2 356 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 LINC01356Q8N9X3 169 aa10.05□□□□□ -0.8
CCDC97-201ENST00000269967 K7ERJ3 54 aa10.04□□□□□ -0.8
CCDC97-201ENST00000269967 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
CCDC97-201ENST00000269967 TAX1BP3O14907 124 aa10.04□□□□□ -0.8
CCDC97-201ENST00000269967 SUMO2P61956 95 aaKnown RBP10.04□□□□□ -0.8
CCDC97-201ENST00000269967 SNRPD3P62318 126 aaKnown RBP10.04□□□□□ -0.8
CCDC97-201ENST00000269967 Q8N8P6 123 aa10.04□□□□□ -0.8
CCDC97-201ENST00000269967 NHP2Q9NX24 153 aaKnown RBP10.04□□□□□ -0.8
CCDC97-201ENST00000269967 U3KQK5 164 aa10.04□□□□□ -0.8
CCDC97-201ENST00000269967 ITPR2Q14571 2701 aa10.03□□□□□ -0.8
CCDC97-201ENST00000269967 DPM2O94777 84 aa10.03□□□□□ -0.8
CCDC97-201ENST00000269967 C2orf91Q6ZV80 131 aa10.03□□□□□ -0.8
CCDC97-201ENST00000269967 SLURP1P55000 103 aa10.03□□□□□ -0.8
CCDC97-201ENST00000269967 CD300EQ496F6 205 aaPredicted RBP10.03□□□□□ -0.8
CCDC97-201ENST00000269967 DPH3P1Q9H4G8 78 aa10.03□□□□□ -0.8
CCDC97-201ENST00000269967 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
CCDC97-201ENST00000269967 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.8
CCDC97-201ENST00000269967 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.8
CCDC97-201ENST00000269967 A0A087WW49 117 aa10.02□□□□□ -0.8
CCDC97-201ENST00000269967 ODF1Q14990 250 aa10.02□□□□□ -0.8
CCDC97-201ENST00000269967 ORAOV1Q8WV07 137 aa10.02□□□□□ -0.8
CCDC97-201ENST00000269967 U3KQE9 123 aa10.02□□□□□ -0.8
CCDC97-201ENST00000269967 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
CCDC97-201ENST00000269967 Q96MF0 132 aa10.02□□□□□ -0.81
CCDC97-201ENST00000269967 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
CCDC97-201ENST00000269967 GATD1Q8NB37 220 aa10.02□□□□□ -0.81
CCDC97-201ENST00000269967 SMIM2Q9BVW6 85 aa10.02□□□□□ -0.81
CCDC97-201ENST00000269967 APCP25054 2843 aa10.01□□□□□ -0.81
CCDC97-201ENST00000269967 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
CCDC97-201ENST00000269967 A6NDN8 102 aa10.01□□□□□ -0.81
CCDC97-201ENST00000269967 ATP5LO75964 103 aa10.01□□□□□ -0.81
CCDC97-201ENST00000269967 HOXD3P31249 432 aaPredicted RBP10.01□□□□□ -0.81
CCDC97-201ENST00000269967 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
CCDC97-201ENST00000269967 MTURNQ8N3F0 131 aa10.01□□□□□ -0.81
CCDC97-201ENST00000269967 HIST1H4GQ99525 98 aa10.01□□□□□ -0.81
CCDC97-201ENST00000269967 DEFB131AP59861 70 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 DEFB125Q8N687 156 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 OCIAD2Q56VL3 154 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 TCTEX1D4Q5JR98 221 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 NRACQ8N912 160 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 CST9LQ9H4G1 147 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 RASL10AQ92737 203 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 CYSLTR1Q9Y271 337 aa10□□□□□ -0.81
CCDC97-201ENST00000269967 MUC4Q99102 2169 aa9.99□□□□□ -0.81
CCDC97-201ENST00000269967 TMEM170BQ5T4T1 132 aa9.99□□□□□ -0.81
CCDC97-201ENST00000269967 RNASE3P12724 160 aaKnown RBP9.99□□□□□ -0.81
CCDC97-201ENST00000269967 ZNF876PQ49A33 203 aa9.99□□□□□ -0.81
CCDC97-201ENST00000269967 DUSP14O95147 198 aaKnown RBP9.99□□□□□ -0.81
CCDC97-201ENST00000269967 OR11H1Q8NG94 326 aa9.99□□□□□ -0.81
CCDC97-201ENST00000269967 FXYD2P54710 66 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms