RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 GAGE12JA6NER3 117 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE7O76087 117 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE12FP0CL80 117 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE12GP0CL81 117 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE12IP0CL82 117 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE4Q13068 117 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 MBD6Q96DN6 1003 aa9.02□□□□□ -0.97
VPS33A-201ENST00000267199 A0A1W2PRX2 142 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 BPTFQ12830 3046 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 RS1O15537 224 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 PAX4O43316 350 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 GNRH2O43555 120 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 USMG5Q96IX5 58 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 ARHGAP32A7KAX9 2087 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
VPS33A-201ENST00000267199 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
VPS33A-201ENST00000267199 FAM223BA6NKX1 122 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 IGLV1-47P01700 117 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
VPS33A-201ENST00000267199 RBMY1A1P0DJD3 496 aaKnown RBP9.01□□□□□ -0.97
VPS33A-201ENST00000267199 RBMY1CP0DJD4 496 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 FAM223AQ8IWN6 122 aa9.01□□□□□ -0.97
VPS33A-201ENST00000267199 IGKV1D-37A0A075B6S9 117 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 ODF1Q14990 250 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE5Q13069 117 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 GAGE6Q13070 117 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 PRAC2D3DTV9 90 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 CRPP02741 224 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 NDUFA12Q9UI09 145 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 CPAMD8Q8IZJ3 1885 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 INS-IGF2F8WCM5 200 aa9□□□□□ -0.97
VPS33A-201ENST00000267199 B4DSR2 109 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
VPS33A-201ENST00000267199 CFC1BP0CG36 223 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 CFC1P0CG37 223 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 CRYBA4P53673 196 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 CARD19Q96LW7 228 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 IGHV3-16A0A0C4DH30 117 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 TEX22C9J3V5 150 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
VPS33A-201ENST00000267199 RANBP2P49792 3224 aaKnown RBP8.99□□□□□ -0.97
VPS33A-201ENST00000267199 IGHV3-38A0A0C4DH36 116 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 PRO3102Q9H379 93 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 NAV2Q8IVL1 2488 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 FOXI1Q12951 378 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 IGF2-ASQ6U949 168 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 TMEM141Q96I45 108 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 TRPT1Q86TN4 253 aaKnown RBP8.98□□□□□ -0.97
VPS33A-201ENST00000267199 TRGV1A0A0A0MS02 117 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 HIGD1BQ9P298 99 aa8.98□□□□□ -0.97
VPS33A-201ENST00000267199 IGHV1-69DA0A0B4J2H0 117 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 IGHV1-69P01742 117 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 TEN1Q86WV5 123 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 MLST8Q9BVC4 326 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 CRYGCP07315 174 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 SYNJ2BPP57105 145 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 CITED1Q99966 193 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 A0A0C4DFX4 3053 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 IGLV11-55A0A075B6I3 123 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 A4D1N5 150 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 PIP4P2Q8N4L2 257 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 UBE2E2Q96LR5 201 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 PEMTQ9UBM1 199 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 STHQ8IWL8 128 aa8.97□□□□□ -0.97
VPS33A-201ENST00000267199 IGHV7-81A0A0B4J1V7 117 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 CTSGP08311 255 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 DEFB1P60022 68 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 ZNF493Q6ZR52 646 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 Q8N976 141 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 RASL10AQ92737 203 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 LINC00574Q9H8X3 128 aa8.96□□□□□ -0.97
VPS33A-201ENST00000267199 USP9YO00507 2555 aaPredicted RBP8.96□□□□□ -0.97
VPS33A-201ENST00000267199 IGKV2D-26A0A0A0MRZ7 120 aa8.96□□□□□ -0.98
VPS33A-201ENST00000267199 LGALS1P09382 135 aaKnown RBP8.96□□□□□ -0.98
VPS33A-201ENST00000267199 SETD2Q9BYW2 2564 aaPredicted RBP8.96□□□□□ -0.98
VPS33A-201ENST00000267199 TRGV4A0A0C4DH28 118 aa8.96□□□□□ -0.98
VPS33A-201ENST00000267199 Q8N7P7 452 aa8.96□□□□□ -0.98
VPS33A-201ENST00000267199 ANKRD29Q8N6D5 301 aa8.95□□□□□ -0.98
VPS33A-201ENST00000267199 RPL39P62891 51 aaKnown RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 MKI67P46013 3256 aaKnown RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 USP9XQ93008 2570 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 VWC2LB2RUY7 222 aa8.95□□□□□ -0.98
VPS33A-201ENST00000267199 I3L3M4 83 aa8.95□□□□□ -0.98
VPS33A-201ENST00000267199 HOXB4P17483 251 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 ZNF80P51504 273 aaPredicted RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 RPL36AP83881 106 aaKnown RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 CFAP161Q6P656 301 aa8.95□□□□□ -0.98
VPS33A-201ENST00000267199 RPL36ALQ969Q0 106 aaKnown RBP8.95□□□□□ -0.98
VPS33A-201ENST00000267199 DSCAMO60469 2012 aa8.95□□□□□ -0.98
VPS33A-201ENST00000267199 EXPH5Q8NEV8 1989 aa8.95□□□□□ -0.98
VPS33A-201ENST00000267199 MSMBP08118 114 aa8.94□□□□□ -0.98
VPS33A-201ENST00000267199 DEFB131AP59861 70 aa8.94□□□□□ -0.98
VPS33A-201ENST00000267199 NPBQ8NG41 125 aa8.94□□□□□ -0.98
VPS33A-201ENST00000267199 ABCA2Q9BZC7 2435 aa8.94□□□□□ -0.98
VPS33A-201ENST00000267199 LEPROTO15243 131 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms