RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 VPREB1P12018 145 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 LTBRP36941 435 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 CTRLP40313 264 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 NSUN5P1Q3KNT7 163 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 FANCD2OSQ96PS1 177 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 RS1O15537 224 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 DAND5Q8N907 189 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 MDS2Q8NDY4 140 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 CYYR1Q96J86 154 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 COL24A1Q17RW2 1714 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 LOXL1Q08397 574 aaPredicted RBP4.31□□□□□ -1.72
XRN1-201ENST00000264951 C1orf195Q5TG92 126 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 XCL2Q9UBD3 114 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 IGKV3D-7A0A0C4DH55 119 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 MSMBP08118 114 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 P0DMU3 169 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 FAM231AP0DMU4 169 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 FAM231CP0DMU5 169 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 Q6Q795 121 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 PCP2Q8IVA1 136 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 CRIPAKQ8N1N5 446 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 Q8NFD4 153 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 ZMAT4Q9H898 229 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 ANK1P16157 1881 aa4.31□□□□□ -1.72
XRN1-201ENST00000264951 COL5A3P25940 1745 aaPredicted RBP4.3□□□□□ -1.72
XRN1-201ENST00000264951 NYNRINQ9P2P1 1898 aaKnown RBP4.3□□□□□ -1.72
XRN1-201ENST00000264951 K7EQD1 137 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 LECT2O14960 151 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 COX7BP24311 80 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 FGFBP3Q8TAT2 258 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 C8orf49Q96NF6 230 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 B9D2Q9BPU9 175 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 NDUFA11Q86Y39 141 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 MED12LQ86YW9 2145 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 CCDC140Q96MF4 163 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 SELENOKQ9Y6D0 94 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 ATP6V0E1O15342 81 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 UFSP1Q6NVU6 142 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 RNASE8Q8TDE3 154 aaKnown RBP4.3□□□□□ -1.72
XRN1-201ENST00000264951 TRBV7-3A0A075B6L6 115 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 FAM222AQ5U5X8 452 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 C9orf47Q6ZRZ4 202 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 DKK4Q9UBT3 224 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 CUL9Q8IWT3 2517 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 TGFBR3LH3BV60 316 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 MIAQ16674 131 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 C17orf77Q96MU5 243 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 SERP1Q9Y6X1 66 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 SPRY4Q9C004 299 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 MYLKQ15746 1914 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 CCL18P55774 89 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
XRN1-201ENST00000264951 ADAMTSL1Q8N6G6 1762 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 IGKV4-1P06312 121 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 C3orf56Q8N813 242 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 A6NED7 52 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 CD24P25063 80 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 XCL1P47992 114 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 BLCAPP62952 87 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 C20orf197Q8N268 126 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 ABCA2Q9BZC7 2435 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 SPART-AS1P0CW21 52 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 WFDC2Q14508 124 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 ZNF491Q8N8L2 437 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 LOC285556D6RIA3 1793 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 WT1-ASQ06250 92 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 A0A0G2JRQ6 117 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 WFDC11Q8NEX6 87 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 PLXNA1Q9UIW2 1896 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 IGKV2D-24A0A075B6R9 120 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 ZNF726P1Q15940 193 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 ZNF831Q5JPB2 1677 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 TIMM17BO60830 172 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 FXYD2P54710 66 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 FAM120AOSQ5T036 256 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 C17orf82Q86X59 251 aaPredicted RBP4.29□□□□□ -1.72
XRN1-201ENST00000264951 FAM110AQ9BQ89 295 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 MDFICQ9P1T7 246 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 SPRR3Q9UBC9 169 aa4.29□□□□□ -1.72
XRN1-201ENST00000264951 SLX1AQ9BQ83 275 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 K7EMT4 169 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 Q8N9L7 120 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 FLVCR1-AS1Q8TAF5 88 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 UBE2D2P62837 147 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 AGPAT4-IT1Q9H0P7 198 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 TP73-AS1Q9UF72 201 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 IGKV1-6A0A0C4DH72 117 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 COX7CP15954 63 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 ODF1Q14990 250 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 GTSF1Q8WW33 167 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 F8P00451 2351 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 TAF1LQ8IZX4 1826 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 EIF4EBP1Q13541 118 aaPredicted RBP4.28□□□□□ -1.72
XRN1-201ENST00000264951 ODF3Q96PU9 254 aa4.28□□□□□ -1.72
XRN1-201ENST00000264951 KLK9Q9UKQ9 250 aa4.28□□□□□ -1.73
XRN1-201ENST00000264951 RPL18AQ02543 176 aaKnown RBP4.27□□□□□ -1.73
XRN1-201ENST00000264951 DEFB121Q5J5C9 76 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 IGF2BP2-AS1Q96M15 143 aa4.27□□□□□ -1.73
XRN1-201ENST00000264951 RETNQ9HD89 108 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms