RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 CCL24O00175 119 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 A0A0J9YXV3 536 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 A4D1N5 150 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 H3BUA1 57 aa14.02□□□□□ -0.17
COL5A3-201ENST00000264828 K7EQD1 137 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 GYPEP15421 78 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 WFDC9Q8NEX5 89 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 SND1-IT1Q9HBX3 110 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 GP9P14770 177 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 ESM1Q9NQ30 184 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 HIST2H2BCQ6DN03 193 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 TTTY13Q9BZ97 58 aa14.01□□□□□ -0.17
COL5A3-201ENST00000264828 DOCK10Q96BY6 2186 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 VPREB3Q9UKI3 123 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 RPL39P62891 51 aaKnown RBP14□□□□□ -0.17
COL5A3-201ENST00000264828 CAMK2N2Q96S95 79 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 FGF23Q9GZV9 251 aaPredicted RBP14□□□□□ -0.17
COL5A3-201ENST00000264828 KAAG1Q9UBP8 84 aa14□□□□□ -0.17
COL5A3-201ENST00000264828 CHKB-CPT1BH3BT56 60 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 C1orf43Q9BWL3 253 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 ZMAT4Q9H898 229 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 A0A1B0GX51 115 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 FUSP35637 526 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL5A3-201ENST00000264828 FXYD2P54710 66 aa13.99□□□□□ -0.17
COL5A3-201ENST00000264828 I3L2K1 104 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 ACYP1P07311 99 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 A0A0B4J2C4 111 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 FAM236AA0A1B0GUQ0 79 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 FAM236BA0A1B0GV22 79 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 IGHV4-38-2P0DP08 117 aa13.98□□□□□ -0.17
COL5A3-201ENST00000264828 WFDC2Q14508 124 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 LINC01545Q5VT33 79 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 SMIM20Q8N5G0 67 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 PLA2G2EQ9NZK7 142 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 TIMM17AQ99595 171 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 AJUBAQ96IF1 538 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 PATE2Q6UY27 113 aa13.97□□□□□ -0.17
COL5A3-201ENST00000264828 TIRAPP58753 221 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 NPBQ8NG41 125 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 CENPVL3A0A0U1RRI6 287 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 C8orf31Q8N9H6 132 aa13.96□□□□□ -0.17
COL5A3-201ENST00000264828 IGHV7-81A0A0B4J1V7 117 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 COX7A2LO14548 114 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 GTSF1Q8WW33 167 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 PLXND1Q9Y4D7 1925 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 HEATR5AQ86XA9 2040 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 DOCK8Q8NF50 2099 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 K7EIM0 57 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 CLEC2BQ92478 149 aa13.96□□□□□ -0.18
COL5A3-201ENST00000264828 PSMB8P28062 276 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 ATP6V0E2Q8NHE4 81 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 KIF26AQ9ULI4 1882 aaPredicted RBP13.95□□□□□ -0.18
COL5A3-201ENST00000264828 PRAC2D3DTV9 90 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 BAALCQ8WXS3 180 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 ZNF503Q96F45 646 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 C16orf74Q96GX8 76 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 LENEPQ9Y5L5 61 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 CADP27708 2225 aa13.95□□□□□ -0.18
COL5A3-201ENST00000264828 WT1P19544 449 aaPredicted RBP13.95□□□□□ -0.18
COL5A3-201ENST00000264828 PIFOQ8TCI5 191 aa13.94□□□□□ -0.18
COL5A3-201ENST00000264828 LINC01620Q4KN68 170 aa13.94□□□□□ -0.18
COL5A3-201ENST00000264828 TMEM61Q8N0U2 210 aa13.93□□□□□ -0.18
COL5A3-201ENST00000264828 BLCAPP62952 87 aa13.93□□□□□ -0.18
COL5A3-201ENST00000264828 RNASE8Q8TDE3 154 aaKnown RBP13.93□□□□□ -0.18
COL5A3-201ENST00000264828 DOCK7Q96N67 2140 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 OPRPNQ99935 248 aaPredicted RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 IGLV11-55A0A075B6I3 123 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 Q8N1Y9 231 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DAZ2Q13117 558 aaKnown RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DAZ4Q86SG3 579 aaKnown RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 C14orf132Q9NPU4 83 aa13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DAZ3Q9NR90 486 aaKnown RBP13.92□□□□□ -0.18
COL5A3-201ENST00000264828 DEFB1P60022 68 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 CTSGP08311 255 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 C16orf54Q6UWD8 224 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 DIDO1Q9BTC0 2240 aaKnown RBP13.91□□□□□ -0.18
COL5A3-201ENST00000264828 H0YGX0 51 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 NREPQ16612 68 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 DOPEY2Q9Y3R5 2298 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 IGHV4-61A0A0C4DH41 118 aa13.91□□□□□ -0.18
COL5A3-201ENST00000264828 LGALS9O00182 355 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 IGKV1-17P01599 117 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 TOMM6Q96B49 74 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 COA6Q5JTJ3 125 aaKnown RBP13.9□□□□□ -0.18
COL5A3-201ENST00000264828 ATOX1O00244 68 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 TAX1BP3O14907 124 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 TEN1Q86WV5 123 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 IGHV4OR15-8A0A075B7B6 117 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 A0A087WW49 117 aa13.9□□□□□ -0.18
COL5A3-201ENST00000264828 SPATA25Q9BR10 227 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 LECT2O14960 151 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 FRMD6-AS1P0C7T7 363 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 MRPL23Q16540 153 aaKnown RBP13.89□□□□□ -0.19
COL5A3-201ENST00000264828 Q8NFD4 153 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 C9orf47Q6ZRZ4 202 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 SLX1AQ9BQ83 275 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 IGHV4-30-2A0A087WSY4 118 aa13.89□□□□□ -0.19
COL5A3-201ENST00000264828 SPANXCQ9NY87 97 aa13.88□□□□□ -0.19
COL5A3-201ENST00000264828 DEFB4AO15263 64 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms