RNA–Protein interactions for RNA: ENST00000263966.7

USP13-201, Transcript of ubiquitin specific peptidase 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP13, Length 8,323 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-201ENST00000263966 PTPRSQ13332 1948 aa13.1□□□□□ -0.31
USP13-201ENST00000263966 TRAV4A0A0B4J268 109 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 PRSS47A8MTI9 375 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 F8W1H4 67 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 HIST2H2BCQ6DN03 193 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 AMTNQ6UX39 209 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 UBE2D1P51668 147 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 LINC00311Q8N616 119 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 IGLV10-54A0A075B6I4 117 aa13.09□□□□□ -0.31
USP13-201ENST00000263966 PRR25Q96S07 402 aa13.08□□□□□ -0.31
USP13-201ENST00000263966 DEFB136Q30KP8 78 aa13.08□□□□□ -0.32
USP13-201ENST00000263966 FLVCR1-AS1Q8TAF5 88 aa13.08□□□□□ -0.32
USP13-201ENST00000263966 COX7B2Q8TF08 81 aa13.08□□□□□ -0.32
USP13-201ENST00000263966 GPR179Q6PRD1 2367 aa13.08□□□□□ -0.32
USP13-201ENST00000263966 J3QQQ9 107 aa13.08□□□□□ -0.32
USP13-201ENST00000263966 LENEPQ9Y5L5 61 aa13.08□□□□□ -0.32
USP13-201ENST00000263966 H0YIZ8 118 aa13.07□□□□□ -0.32
USP13-201ENST00000263966 H3BRN7 92 aa13.07□□□□□ -0.32
USP13-201ENST00000263966 RBAKDNA6NC62 111 aa13.07□□□□□ -0.32
USP13-201ENST00000263966 LINC01620Q4KN68 170 aa13.07□□□□□ -0.32
USP13-201ENST00000263966 NAA38Q9BRA0 125 aaKnown RBP13.07□□□□□ -0.32
USP13-201ENST00000263966 MRPL51Q4U2R6 128 aaKnown RBP13.07□□□□□ -0.32
USP13-201ENST00000263966 Q9H8V8 135 aa13.07□□□□□ -0.32
USP13-201ENST00000263966 NDUFC2O95298 119 aa13.07□□□□□ -0.32
USP13-201ENST00000263966 WFDC1Q9HC57 220 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 C11orf45Q8TAV5 145 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 TRAV26-2A0A0B4J265 109 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 HILS1P60008 231 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 C5orf38Q86SI9 138 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 COL4A5P29400 1685 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 LRCOL1A6NCL2 159 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 VOPP1Q96AW1 172 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 SPATA25Q9BR10 227 aa13.06□□□□□ -0.32
USP13-201ENST00000263966 SLURP1P55000 103 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 H0YGX0 51 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 RS1O15537 224 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 RNASE13Q5GAN3 156 aaKnown RBP13.05□□□□□ -0.32
USP13-201ENST00000263966 TTC28Q96AY4 2481 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 TMEM213A2RRL7 107 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 BAALC-AS2P0C853 105 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 PNRC2Q9NPJ4 139 aaKnown RBP13.05□□□□□ -0.32
USP13-201ENST00000263966 TRBV7-3A0A075B6L6 115 aa13.05□□□□□ -0.32
USP13-201ENST00000263966 TEX22C9J3V5 150 aa13.04□□□□□ -0.32
USP13-201ENST00000263966 C17orf82Q86X59 251 aaPredicted RBP13.04□□□□□ -0.32
USP13-201ENST00000263966 CEND1Q8N111 149 aa13.04□□□□□ -0.32
USP13-201ENST00000263966 ACYP1P07311 99 aa13.04□□□□□ -0.32
USP13-201ENST00000263966 DYNAPQ8N1N2 210 aa13.04□□□□□ -0.32
USP13-201ENST00000263966 SPRY2O43597 315 aa13.04□□□□□ -0.32
USP13-201ENST00000263966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.04□□□□□ -0.32
USP13-201ENST00000263966 IGKV2-29A2NJV5 120 aaPredicted RBP13.04□□□□□ -0.32
USP13-201ENST00000263966 UBE2D4Q9Y2X8 147 aa13.04□□□□□ -0.32
USP13-201ENST00000263966 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
USP13-201ENST00000263966 B3GALT5-AS1P59052 145 aa13.03□□□□□ -0.32
USP13-201ENST00000263966 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
USP13-201ENST00000263966 APRG1Q8IVJ8 170 aa13.03□□□□□ -0.32
USP13-201ENST00000263966 HIVEP3Q5T1R4 2406 aa13.03□□□□□ -0.32
USP13-201ENST00000263966 RNF144BQ7Z419 303 aa13.03□□□□□ -0.32
USP13-201ENST00000263966 ANKHD1Q8IWZ3 2542 aaKnown RBP13.02□□□□□ -0.32
USP13-201ENST00000263966 LHFPL1Q86WI0 220 aa13.02□□□□□ -0.32
USP13-201ENST00000263966 MUSTN1Q8IVN3 82 aa13.02□□□□□ -0.32
USP13-201ENST00000263966 C3orf79P0CE67 100 aa13.02□□□□□ -0.32
USP13-201ENST00000263966 LOXP28300 417 aaPredicted RBP13.02□□□□□ -0.32
USP13-201ENST00000263966 CRYBA4P53673 196 aa13.02□□□□□ -0.32
USP13-201ENST00000263966 MYCNOSP40205 109 aa13.02□□□□□ -0.33
USP13-201ENST00000263966 UBE2V1Q13404 147 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 DEFB135Q30KP9 77 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 KAAG1Q9UBP8 84 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 ZFP2Q6ZN57 461 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 Q6ZVH6 145 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 HIST3H2BBQ8N257 126 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 PRSS57Q6UWY2 283 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 DEFB125Q8N687 156 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 DIRC1Q969H9 104 aa13.01□□□□□ -0.33
USP13-201ENST00000263966 IGLV3-9A0A075B6K5 115 aa13□□□□□ -0.33
USP13-201ENST00000263966 ANKRD39Q53RE8 183 aa13□□□□□ -0.33
USP13-201ENST00000263966 J3QRE1 110 aa13□□□□□ -0.33
USP13-201ENST00000263966 SND1-IT1Q9HBX3 110 aa13□□□□□ -0.33
USP13-201ENST00000263966 SMIM20Q8N5G0 67 aa13□□□□□ -0.33
USP13-201ENST00000263966 LINC00479Q96M42 142 aa13□□□□□ -0.33
USP13-201ENST00000263966 ODF3L1Q8IXM7 274 aa12.99□□□□□ -0.33
USP13-201ENST00000263966 PRR15LQ9BU68 103 aa12.99□□□□□ -0.33
USP13-201ENST00000263966 ZFHX2Q9C0A1 2572 aaPredicted RBP12.99□□□□□ -0.33
USP13-201ENST00000263966 SMIM27A0A1W2PRY6 76 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 NFE4Q86UQ8 179 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 A8MWP6 167 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 LGALS9BQ3B8N2 356 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 LY6G6FQ5SQ64 297 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 LGALS9CQ6DKI2 356 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 TMEM256-PLSCR3K7ERE1 68 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 SVIPQ8NHG7 77 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 ZNRD1Q9P1U0 126 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 C9orf118A6NHY6 69 aa12.98□□□□□ -0.33
USP13-201ENST00000263966 THSD7BQ9C0I4 1608 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 C17orf58Q2M2W7 97 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 PRR20EP86478 221 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 PRR20CP86479 221 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 PRR20DP86480 221 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 PRR20BP86481 221 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 PRR20AP86496 221 aa12.97□□□□□ -0.33
USP13-201ENST00000263966 PRB1P04280 392 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms