RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 DUSP14O95147 198 aaKnown RBP9.42□□□□□ -0.9
CHMP3-201ENST00000263856 PLEKHB2Q96CS7 222 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 DPH3P1Q9H4G8 78 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 TRAV21A0A0B4J279 112 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 PRSS29PA6NIE9 313 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 E9PLD3 99 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 HOXA3O43365 443 aaPredicted RBP9.42□□□□□ -0.9
CHMP3-201ENST00000263856 PSMB2P49721 201 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 C9orf47Q6ZRZ4 202 aa9.42□□□□□ -0.9
CHMP3-201ENST00000263856 J3QR89 54 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 SIGMAR1Q99720 223 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 NOTCH3Q9UM47 2321 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 IGHV3-64A0A075B6Q5 118 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 TMEM170BQ5T4T1 132 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 BAALCQ8WXS3 180 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 CRYBG3Q68DQ2 2970 aa9.41□□□□□ -0.9
CHMP3-201ENST00000263856 GAGE12HA6NDE8 117 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 EDN2P20800 178 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
CHMP3-201ENST00000263856 RRN3P1Q2M238 152 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 C9orf139Q6ZV77 190 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 C5orf56Q8N8D9 126 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 ZNF256Q9Y2P7 627 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-201ENST00000263856 H7C2G1 150 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 LGALS1P09382 135 aaKnown RBP9.4□□□□□ -0.9
CHMP3-201ENST00000263856 MRAP2Q96G30 205 aa9.4□□□□□ -0.9
CHMP3-201ENST00000263856 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-201ENST00000263856 SPANXB1Q9NS25 103 aaPredicted RBP9.4□□□□□ -0.9
CHMP3-201ENST00000263856 CUBNO60494 3623 aa9.4□□□□□ -0.91
CHMP3-201ENST00000263856 PIFOQ8TCI5 191 aa9.4□□□□□ -0.91
CHMP3-201ENST00000263856 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.91
CHMP3-201ENST00000263856 C1orf122Q6ZSJ8 110 aa9.39□□□□□ -0.91
CHMP3-201ENST00000263856 MUC4Q99102 2169 aa9.39□□□□□ -0.91
CHMP3-201ENST00000263856 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
CHMP3-201ENST00000263856 HTN1P15515 57 aa9.39□□□□□ -0.91
CHMP3-201ENST00000263856 ZFAND2AQ8N6M9 145 aa9.39□□□□□ -0.91
CHMP3-201ENST00000263856 PSMG3-AS1Q96PY0 264 aa9.39□□□□□ -0.91
CHMP3-201ENST00000263856 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 LINC01546A6NGU7 62 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 F8W1H4 67 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 LY6DQ14210 128 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 FBXL19-AS1Q494R0 122 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 PSMG4Q5JS54 123 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 CD7P09564 240 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 NEXN-AS1Q8NBZ9 246 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 PTH2Q96A98 100 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 TOMM6Q96B49 74 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 AJUBAQ96IF1 538 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 MOB4Q9Y3A3 225 aa9.38□□□□□ -0.91
CHMP3-201ENST00000263856 FAM159AQ6UWV7 190 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 ZFP2Q6ZN57 461 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 KLRB1Q12918 225 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 C20orf78Q9BR46 151 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 RHPN1-AS1Q9BWJ2 59 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 ABCA2Q9BZC7 2435 aa9.37□□□□□ -0.91
CHMP3-201ENST00000263856 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 BLCAPP62952 87 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 GPHB5Q86YW7 130 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 H3BUX3 64 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 TMEM95Q3KNT9 176 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 Q6ZS46 218 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 NDUFS8O00217 210 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 LMO4P61968 165 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 ZNF56Q15929 161 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 TAL2Q16559 108 aa9.36□□□□□ -0.91
CHMP3-201ENST00000263856 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
CHMP3-201ENST00000263856 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
CHMP3-201ENST00000263856 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
CHMP3-201ENST00000263856 TMEM238LA0A1B0GVL6 79 aa9.35□□□□□ -0.91
CHMP3-201ENST00000263856 A6NJY4 79 aa9.35□□□□□ -0.91
CHMP3-201ENST00000263856 OVOL1O14753 267 aa9.35□□□□□ -0.91
CHMP3-201ENST00000263856 ZNF688P0C7X2 276 aa9.35□□□□□ -0.91
CHMP3-201ENST00000263856 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
CHMP3-201ENST00000263856 MORN3Q6PF18 240 aaPredicted RBP9.35□□□□□ -0.91
CHMP3-201ENST00000263856 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 Q5PR19 223 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 HERVK_113P61574 105 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 SYT8Q8NBV8 401 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 ITLN2Q8WWU7 325 aaPredicted RBP9.34□□□□□ -0.91
CHMP3-201ENST00000263856 KIR2DL4Q99706 377 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 RAX2Q96IS3 184 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 KLK9Q9UKQ9 250 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 U3KQE9 123 aa9.34□□□□□ -0.91
CHMP3-201ENST00000263856 IGHV4-4A0A075B6R2 117 aa9.33□□□□□ -0.92
CHMP3-201ENST00000263856 SUMO4Q6EEV6 95 aa9.33□□□□□ -0.92
CHMP3-201ENST00000263856 DLX4Q92988 240 aaPredicted RBP9.33□□□□□ -0.92
CHMP3-201ENST00000263856 SDHAF1A6NFY7 115 aa9.33□□□□□ -0.92
CHMP3-201ENST00000263856 FAM223BA6NKX1 122 aa9.33□□□□□ -0.92
CHMP3-201ENST00000263856 FAM223AQ8IWN6 122 aa9.33□□□□□ -0.92
CHMP3-201ENST00000263856 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
CHMP3-201ENST00000263856 TSPAN13O95857 204 aa9.32□□□□□ -0.92
CHMP3-201ENST00000263856 CLEC2AQ6UVW9 174 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms