RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 PRAC2D3DTV9 90 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 LINC01587Q99440 93 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 SPANXB1Q9NS25 103 aaPredicted RBP12.64□□□□□ -0.39
SREBF1-201ENST00000261646 CFC1BP0CG36 223 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 CFC1P0CG37 223 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 TLN2Q9Y4G6 2542 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 C9orf153Q5TBE3 101 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 KAAG1Q9UBP8 84 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 PIEZO1Q92508 2521 aa12.64□□□□□ -0.39
SREBF1-201ENST00000261646 LY6G5BQ8NDX9 201 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 TMEM141Q96I45 108 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 EDA2RQ9HAV5 297 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 EYSQ5T1H1 3165 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 TEX22C9J3V5 150 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 C8orf31Q8N9H6 132 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 E9PLD3 99 aa12.63□□□□□ -0.39
SREBF1-201ENST00000261646 SEM1Q6ZVN7 128 aa12.62□□□□□ -0.39
SREBF1-201ENST00000261646 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-201ENST00000261646 OVOL3O00110 214 aa12.62□□□□□ -0.39
SREBF1-201ENST00000261646 GNRH2O43555 120 aa12.62□□□□□ -0.39
SREBF1-201ENST00000261646 DUSP14O95147 198 aaKnown RBP12.62□□□□□ -0.39
SREBF1-201ENST00000261646 SAA4P35542 130 aa12.62□□□□□ -0.39
SREBF1-201ENST00000261646 MYCNOSP40205 109 aa12.62□□□□□ -0.39
SREBF1-201ENST00000261646 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-201ENST00000261646 ITLN2Q8WWU7 325 aaPredicted RBP12.62□□□□□ -0.39
SREBF1-201ENST00000261646 BRD3OSQ6XYD6 125 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 C7orf69Q9H7B7 122 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 ARHGAP32A7KAX9 2087 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 MOB4Q9Y3A3 225 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 A4D1N5 150 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 LY6DQ14210 128 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 MORN3Q6PF18 240 aaPredicted RBP12.61□□□□□ -0.39
SREBF1-201ENST00000261646 C22orf34Q6ZV56 151 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 ANKRD29Q8N6D5 301 aa12.61□□□□□ -0.39
SREBF1-201ENST00000261646 F6UB75 175 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 MT-ATP8P03928 68 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 CRIP1P50238 77 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 ATP5J2P56134 94 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 KNCNA6PVL3 124 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 CTSGP08311 255 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 RNF183Q96D59 192 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 TM2D2Q9BX73 214 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 MYO18BQ8IUG5 2567 aa12.6□□□□□ -0.39
SREBF1-201ENST00000261646 TRGV11A0A075B6L2 103 aa12.59□□□□□ -0.39
SREBF1-201ENST00000261646 NDUFA12Q9UI09 145 aa12.59□□□□□ -0.39
SREBF1-201ENST00000261646 USP9YO00507 2555 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-201ENST00000261646 GAGE2AQ6NT46 116 aa12.59□□□□□ -0.39
SREBF1-201ENST00000261646 PHLDA1Q8WV24 401 aaPredicted RBP12.59□□□□□ -0.39
SREBF1-201ENST00000261646 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
SREBF1-201ENST00000261646 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
SREBF1-201ENST00000261646 LGALS1P09382 135 aaKnown RBP12.59□□□□□ -0.39
SREBF1-201ENST00000261646 MAPKAPK5-AS1Q8N8E1 139 aa12.59□□□□□ -0.39
SREBF1-201ENST00000261646 PIMREGQ9BSJ6 248 aa12.58□□□□□ -0.4
SREBF1-201ENST00000261646 GRNP28799 593 aaKnown RBP12.58□□□□□ -0.4
SREBF1-201ENST00000261646 TRPT1Q86TN4 253 aaKnown RBP12.58□□□□□ -0.4
SREBF1-201ENST00000261646 CLUHP3Q96NS8 147 aa12.58□□□□□ -0.4
SREBF1-201ENST00000261646 IGLV11-55A0A075B6I3 123 aa12.57□□□□□ -0.4
SREBF1-201ENST00000261646 ZFP2Q6ZN57 461 aa12.57□□□□□ -0.4
SREBF1-201ENST00000261646 SPANXA1Q9NS26 97 aa12.57□□□□□ -0.4
SREBF1-201ENST00000261646 Q6ZUT4 128 aa12.57□□□□□ -0.4
SREBF1-201ENST00000261646 PRIMA1Q86XR5 153 aa12.57□□□□□ -0.4
SREBF1-201ENST00000261646 CPAMD8Q8IZJ3 1885 aa12.57□□□□□ -0.4
SREBF1-201ENST00000261646 TRAV13-1A0A0B4J241 112 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 RNASE13Q5GAN3 156 aaKnown RBP12.56□□□□□ -0.4
SREBF1-201ENST00000261646 UFSP1Q6NVU6 142 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 WI2-2373I1.2A0A1W2PRP0 233 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 KLK9Q9UKQ9 250 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 TRAV12-2A0A075B6T6 113 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 IGLV1-47P01700 117 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 HIST1H4AP62805 103 aaKnown RBP12.56□□□□□ -0.4
SREBF1-201ENST00000261646 SPINK13Q1W4C9 94 aa12.56□□□□□ -0.4
SREBF1-201ENST00000261646 BUB3O43684 328 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 C3orf56Q8N813 242 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 H3BUX3 64 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 LINC00158P58513 81 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 RPL39P62891 51 aaKnown RBP12.55□□□□□ -0.4
SREBF1-201ENST00000261646 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 SONP18583 2426 aaKnown RBP12.55□□□□□ -0.4
SREBF1-201ENST00000261646 C11orf86A6NJI1 115 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 INSL3P51460 131 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 TCTEX1D4Q5JR98 221 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 GATD1Q8NB37 220 aa12.55□□□□□ -0.4
SREBF1-201ENST00000261646 DAZ1Q9NQZ3 744 aaKnown RBP12.55□□□□□ -0.4
SREBF1-201ENST00000261646 TRAV12-1A0A0B4J245 112 aa12.54□□□□□ -0.4
SREBF1-201ENST00000261646 IGLV2-11P01706 119 aa12.54□□□□□ -0.4
SREBF1-201ENST00000261646 RBAKDNA6NC62 111 aa12.54□□□□□ -0.4
SREBF1-201ENST00000261646 CITED1Q99966 193 aa12.54□□□□□ -0.4
SREBF1-201ENST00000261646 MUSTN1Q8IVN3 82 aa12.54□□□□□ -0.4
SREBF1-201ENST00000261646 I3L3M4 83 aa12.53□□□□□ -0.4
SREBF1-201ENST00000261646 CRPP02741 224 aa12.53□□□□□ -0.4
SREBF1-201ENST00000261646 LINC01620Q4KN68 170 aa12.53□□□□□ -0.4
SREBF1-201ENST00000261646 USP9XQ93008 2570 aaPredicted RBP12.53□□□□□ -0.4
SREBF1-201ENST00000261646 RBMY1BA6NDE4 496 aaKnown RBP12.53□□□□□ -0.4
SREBF1-201ENST00000261646 RBMY1EA6NEQ0 496 aaKnown RBP12.53□□□□□ -0.4
SREBF1-201ENST00000261646 RBMY1DP0C7P1 496 aaKnown RBP12.53□□□□□ -0.4
SREBF1-201ENST00000261646 IGLC6P0CF74 106 aa12.53□□□□□ -0.4
SREBF1-201ENST00000261646 RBMY1A1P0DJD3 496 aaKnown RBP12.53□□□□□ -0.4
SREBF1-201ENST00000261646 RBMY1CP0DJD4 496 aa12.53□□□□□ -0.4
SREBF1-201ENST00000261646 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
SREBF1-201ENST00000261646 ABCA2Q9BZC7 2435 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms