RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 H3BUX3 64 aa12.34□□□□□ -0.43
SNCAIP-202ENST00000261368 SCGB1C2P0DMR2 95 aa12.34□□□□□ -0.43
SNCAIP-202ENST00000261368 COX8CQ7Z4L0 72 aa12.34□□□□□ -0.43
SNCAIP-202ENST00000261368 SPOCK3Q9BQ16 436 aa12.34□□□□□ -0.43
SNCAIP-202ENST00000261368 HIGD1BQ9P298 99 aa12.34□□□□□ -0.43
SNCAIP-202ENST00000261368 TSSC4Q9Y5U2 329 aaPredicted RBP12.34□□□□□ -0.43
SNCAIP-202ENST00000261368 GAGE13Q4V321 117 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 C5orf56Q8N8D9 126 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 HRNRQ86YZ3 2850 aaPredicted RBP12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 TRAV12-3A0A0B4J271 114 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 HOXA3O43365 443 aaPredicted RBP12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 C9orf47Q6ZRZ4 202 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 MRAP2Q96G30 205 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 LINC00477Q96M19 166 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 PSMB2P49721 201 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 JPT2Q9H910 190 aa12.33□□□□□ -0.44
SNCAIP-202ENST00000261368 NACAE9PAV3 2078 aa12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 PRSS29PA6NIE9 313 aa12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 IGHV3-64A0A075B6Q5 118 aa12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 TMEM238C9JI98 176 aa12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 SRSF2Q01130 221 aaKnown RBP12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 ZNF575Q86XF7 245 aa12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 MYO9AB2RTY4 2548 aa12.32□□□□□ -0.44
SNCAIP-202ENST00000261368 OVOL1O14753 267 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 HLA-DRB4P13762 266 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 NBL1P41271 181 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 ZNF56Q15929 161 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 HLA-DRB4X5D2U9 266 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 USP9XQ93008 2570 aaPredicted RBP12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 POLQO75417 2590 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 DUSP14O95147 198 aaKnown RBP12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 HERVK_113P61574 105 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 RASL10AQ92737 203 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 TP53TG1Q9Y2A0 90 aa12.31□□□□□ -0.44
SNCAIP-202ENST00000261368 TLN2Q9Y4G6 2542 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 IGLV2-18A0A075B6J9 118 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 ZNF688P0C7X2 276 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 BLCAPP62952 87 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 KIR2DL4Q99706 377 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 ZMAT4Q9H898 229 aa12.3□□□□□ -0.44
SNCAIP-202ENST00000261368 FOXI2Q6ZQN5 318 aa12.29□□□□□ -0.44
SNCAIP-202ENST00000261368 PTPN13Q12923 2485 aa12.29□□□□□ -0.44
SNCAIP-202ENST00000261368 LMO4P61968 165 aa12.29□□□□□ -0.44
SNCAIP-202ENST00000261368 SIGMAR1Q99720 223 aa12.29□□□□□ -0.44
SNCAIP-202ENST00000261368 CENPEQ02224 2701 aa12.29□□□□□ -0.44
SNCAIP-202ENST00000261368 TRAV12-2A0A075B6T6 113 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 TMEM238LA0A1B0GVL6 79 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 A6NJY4 79 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 RPL39P62891 51 aaKnown RBP12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 SETD2Q9BYW2 2564 aaPredicted RBP12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 AZU1P20160 251 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 TMEM95Q3KNT9 176 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 UCNP55089 124 aa12.28□□□□□ -0.44
SNCAIP-202ENST00000261368 FAM223BA6NKX1 122 aa12.27□□□□□ -0.44
SNCAIP-202ENST00000261368 IGHV4-38-2P0DP08 117 aa12.27□□□□□ -0.44
SNCAIP-202ENST00000261368 FAM223AQ8IWN6 122 aa12.27□□□□□ -0.44
SNCAIP-202ENST00000261368 ZFAND2AQ8N6M9 145 aa12.27□□□□□ -0.44
SNCAIP-202ENST00000261368 BAALCQ8WXS3 180 aa12.27□□□□□ -0.44
SNCAIP-202ENST00000261368 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
SNCAIP-202ENST00000261368 MYO18BQ8IUG5 2567 aa12.27□□□□□ -0.45
SNCAIP-202ENST00000261368 Q1RN00 199 aa12.27□□□□□ -0.45
SNCAIP-202ENST00000261368 MRPL53Q96EL3 112 aaKnown RBP12.27□□□□□ -0.45
SNCAIP-202ENST00000261368 BSNQ9UPA5 3926 aa12.26□□□□□ -0.45
SNCAIP-202ENST00000261368 IGHV1-69DA0A0B4J2H0 117 aa12.26□□□□□ -0.45
SNCAIP-202ENST00000261368 IGHV1-69P01742 117 aa12.26□□□□□ -0.45
SNCAIP-202ENST00000261368 WNK1Q9H4A3 2382 aa12.26□□□□□ -0.45
SNCAIP-202ENST00000261368 DUX5Q96PT3 197 aa12.26□□□□□ -0.45
SNCAIP-202ENST00000261368 E9PLD3 99 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 LGALS1P09382 135 aaKnown RBP12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 ID1P41134 155 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 ATP5J2P56134 94 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 CELSR1Q9NYQ6 3014 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 F8W1H4 67 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 NDUFA4O00483 81 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 EDN2P20800 178 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 TOMM6Q96B49 74 aa12.25□□□□□ -0.45
SNCAIP-202ENST00000261368 GAGE12HA6NDE8 117 aa12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 C20orf78Q9BR46 151 aa12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 KLK9Q9UKQ9 250 aa12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 IGHV4-61A0A0C4DH41 118 aa12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 LGALS3P17931 250 aaKnown RBP12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 Q6ZS46 218 aa12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
SNCAIP-202ENST00000261368 SDHAF1A6NFY7 115 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 GNLYP22749 145 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 TAL2Q16559 108 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 PIFOQ8TCI5 191 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 PIMREGQ9BSJ6 248 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 C11orf86A6NJI1 115 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 INSL3P51460 131 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 CLEC2AQ6UVW9 174 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 IGHV4-39P01824 125 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 DAZ1Q9NQZ3 744 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-202ENST00000261368 BEX4Q9NWD9 120 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms