RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 RSPO4Q2I0M5 234 aaPredicted RBP5.79□□□□□ -1.48
GPNMB-201ENST00000258733 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 F8VRH5 84 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 LST1O00453 97 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 MORN5Q5VZ52 161 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 MDFIQ99750 246 aa5.79□□□□□ -1.48
GPNMB-201ENST00000258733 IGKV1D-17A0A075B6S4 117 aa5.78□□□□□ -1.48
GPNMB-201ENST00000258733 A0A087WZ39 114 aa5.78□□□□□ -1.48
GPNMB-201ENST00000258733 LINC01546A6NGU7 62 aa5.78□□□□□ -1.48
GPNMB-201ENST00000258733 NXPH4O95158 308 aa5.78□□□□□ -1.48
GPNMB-201ENST00000258733 ITLN1Q8WWA0 313 aa5.78□□□□□ -1.48
GPNMB-201ENST00000258733 ADARB2-AS1A8MUL3 147 aa5.78□□□□□ -1.48
GPNMB-201ENST00000258733 SZT2Q5T011 3432 aa5.77□□□□□ -1.48
GPNMB-201ENST00000258733 TRAV8-3A0A0A6YYJ7 113 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 DOCK10Q96BY6 2186 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-201ENST00000258733 NDUFC1O43677 76 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 GFRA3O60609 400 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 ESRGQ1W209 222 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 PIGYQ3MUY2 71 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 FAM216BQ8N7L0 139 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 M0R381 172 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 SH2D1AO60880 128 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 CKS2P33552 79 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 PLGLAQ15195 96 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.49
GPNMB-201ENST00000258733 SPINK9Q5DT21 86 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 PHF5AQ7RTV0 110 aaKnown RBP5.77□□□□□ -1.49
GPNMB-201ENST00000258733 TMEM190Q8WZ59 177 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 TSACCQ96A04 125 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-201ENST00000258733 CTSZQ9UBR2 303 aa5.77□□□□□ -1.49
GPNMB-201ENST00000258733 TTC28Q96AY4 2481 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 IGHV3OR16-10A0A075B7F0 116 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 LINC00205P59089 165 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 Q6ZS46 218 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 CCL17Q92583 94 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 ICOSQ9Y6W8 199 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 ZNF876PQ49A33 203 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 Q6ZS52 159 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 LCA10Q71F78 164 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 KLHL30-AS1Q8NEE0 82 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
GPNMB-201ENST00000258733 TET2Q6N021 2002 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-201ENST00000258733 TRAV3A0A0B4J244 114 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 IGKV1-6A0A0C4DH72 117 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 WISP1O95388 367 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 LAGE3Q14657 143 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 TMEM30BQ3MIR4 351 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 SPRR3Q9UBC9 169 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 IGHV1-45A0A0A0MS14 117 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 TRAV12-1A0A0B4J245 112 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 P0C879 139 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 UBE2BP63146 152 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 FAM53AQ6NSI3 398 aaPredicted RBP5.75□□□□□ -1.49
GPNMB-201ENST00000258733 PRSS33Q8NF86 280 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 RMI2Q96E14 147 aa5.75□□□□□ -1.49
GPNMB-201ENST00000258733 WISP2O76076 250 aa5.74□□□□□ -1.49
GPNMB-201ENST00000258733 TRAV7A0A075B6U4 112 aa5.74□□□□□ -1.49
GPNMB-201ENST00000258733 TRAV23DV6A0A075B6W5 121 aa5.74□□□□□ -1.49
GPNMB-201ENST00000258733 FUSP35637 526 aaKnown RBP eCLIP5.74□□□□□ -1.49
GPNMB-201ENST00000258733 SNURFQ9Y675 71 aa5.74□□□□□ -1.49
GPNMB-201ENST00000258733 NOTCH4Q99466 2003 aa5.74□□□□□ -1.49
GPNMB-201ENST00000258733 MUC6Q6W4X9 2439 aa5.73□□□□□ -1.49
GPNMB-201ENST00000258733 DNAJC13O75165 2243 aa5.73□□□□□ -1.49
GPNMB-201ENST00000258733 IGHV5-51A0A0C4DH38 117 aa5.73□□□□□ -1.49
GPNMB-201ENST00000258733 IGLV2-14P01704 120 aa5.73□□□□□ -1.49
GPNMB-201ENST00000258733 LAMA2P24043 3122 aaKnown RBP5.73□□□□□ -1.49
GPNMB-201ENST00000258733 IGLV3-32A0A0A0MS00 114 aa5.73□□□□□ -1.49
GPNMB-201ENST00000258733 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-201ENST00000258733 LINC01356Q8N9X3 169 aa5.73□□□□□ -1.49
GPNMB-201ENST00000258733 OPRPNQ99935 248 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-201ENST00000258733 USF3Q68DE3 2245 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 E7EQL1 145 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 STATHP02808 62 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 RPL28P46779 137 aaKnown RBP5.72□□□□□ -1.49
GPNMB-201ENST00000258733 BLCAPP62952 87 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 Q1T7F1 81 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 LAMA3Q16787 3333 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 RTTNQ86VV8 2226 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 PKD1L2Q7Z442 2459 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 ADAMTSL4-AS1Q5T5F5 129 aa5.72□□□□□ -1.49
GPNMB-201ENST00000258733 VN1R4Q7Z5H5 301 aa5.71□□□□□ -1.5
GPNMB-201ENST00000258733 EPOPA6NHQ4 379 aa5.71□□□□□ -1.5
GPNMB-201ENST00000258733 BCE1O60756 84 aa5.71□□□□□ -1.5
GPNMB-201ENST00000258733 DNAL4O96015 105 aa5.71□□□□□ -1.5
GPNMB-201ENST00000258733 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-201ENST00000258733 COX8CQ7Z4L0 72 aa5.71□□□□□ -1.5
GPNMB-201ENST00000258733 ZNF318Q5VUA4 2279 aa5.71□□□□□ -1.5
GPNMB-201ENST00000258733 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 MUSTN1Q8IVN3 82 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 FAM167A-AS1Q96KT0 104 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 MKI67P46013 3256 aaKnown RBP5.7□□□□□ -1.5
GPNMB-201ENST00000258733 BDP1A6H8Y1 2624 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 IGKV1-12A0A0C4DH73 117 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 IGKV1D-12P01611 117 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 PRB4P10163 310 aaPredicted RBP5.7□□□□□ -1.5
GPNMB-201ENST00000258733 CD59P13987 128 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 DIRC1Q969H9 104 aa5.7□□□□□ -1.5
GPNMB-201ENST00000258733 PRR25Q96S07 402 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms