RNA–Protein interactions for RNA: ENST00000252595.11

SLC27A1-201, Transcript of solute carrier family 27 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC27A1, Length 3,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1-201ENST00000252595 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
SLC27A1-201ENST00000252595 NHP2Q9NX24 153 aaKnown RBP12.62□□□□□ -0.39
SLC27A1-201ENST00000252595 LINC01356Q8N9X3 169 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 NDUFA4O00483 81 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 LAGE3Q14657 143 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 GAGE10A6NGK3 116 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 K7ERJ3 54 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 DEFB131AP59861 70 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 RPL24P83731 157 aaKnown RBP12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 TMEM170BQ5T4T1 132 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 ZFHX3Q15911 3703 aa12.61□□□□□ -0.39
SLC27A1-201ENST00000252595 CCL25O15444 150 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 USMG5Q96IX5 58 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 NBEAL2Q6ZNJ1 2754 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 IGKCP01834 107 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 COX11Q9Y6N1 276 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 H7C2G1 150 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 OVOL1O14753 267 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 IGHG2P01859 326 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 PPBPP02775 128 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 SRSF9Q13242 221 aaKnown RBP eCLIP12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 BVES-AS1Q5T3Y7 98 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 UBE2E2Q96LR5 201 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 MS4A6AQ9H2W1 248 aa12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 MRPS16Q9Y3D3 137 aaKnown RBP12.6□□□□□ -0.39
SLC27A1-201ENST00000252595 IGLC6P0CF74 106 aa12.59□□□□□ -0.39
SLC27A1-201ENST00000252595 SMPXQ9UHP9 88 aa12.59□□□□□ -0.39
SLC27A1-201ENST00000252595 RNF185Q96GF1 192 aa12.59□□□□□ -0.39
SLC27A1-201ENST00000252595 IGHV3-16A0A0C4DH30 117 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 SRSF1Q07955 248 aaKnown RBP eCLIP12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 RNASE13Q5GAN3 156 aaKnown RBP12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 LINC01545Q5VT33 79 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 A6NDX4 124 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 TCTEX1D4Q5JR98 221 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 IGHV4OR15-8A0A075B7B6 117 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 A0A087WW49 117 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 DPM2O94777 84 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 TMEM190Q8WZ59 177 aa12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
SLC27A1-201ENST00000252595 A0A096LNJ9 63 aa12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 RIPPLY3P57055 190 aa12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 APRG1Q8IVJ8 170 aa12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 MDFICQ9P1T7 246 aa12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 NDUFS8O00217 210 aa12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 KLHL30-AS1Q8NEE0 82 aa12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 GCN1Q92616 2671 aaKnown RBP12.57□□□□□ -0.4
SLC27A1-201ENST00000252595 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 HOXD3P31249 432 aaPredicted RBP12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 CYSLTR1Q9Y271 337 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 COX8AP10176 69 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 SUMO2P61956 95 aaKnown RBP12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 LINC01559Q495D7 138 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 OR11H1Q8NG94 326 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 SPOCK3Q9BQ16 436 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 SCRT2Q9NQ03 307 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 DPH3P1Q9H4G8 78 aa12.56□□□□□ -0.4
SLC27A1-201ENST00000252595 A6NDN8 102 aa12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 CD5LO43866 347 aa12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 IGHV3-53P01767 116 aa12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 RPL39P62891 51 aaKnown RBP12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 SRSF2Q01130 221 aaKnown RBP12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 OR11H12B2RN74 326 aa12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 C2orf66Q6UXQ4 117 aa12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 OR11H2Q8NH07 326 aa12.55□□□□□ -0.4
SLC27A1-201ENST00000252595 ORAOV1Q8WV07 137 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 KIR2DL4Q99706 377 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 ATP5LO75964 103 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 ZFAND2AQ8N6M9 145 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 XCL2Q9UBD3 114 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 APOMO95445 188 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 ZNF493Q6ZR52 646 aa12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 OPRPNQ99935 248 aaPredicted RBP12.54□□□□□ -0.4
SLC27A1-201ENST00000252595 Q8N8P6 123 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 PHLDA1Q8WV24 401 aaPredicted RBP12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 LINC01587Q99440 93 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 CHTOPQ9Y3Y2 248 aaKnown RBP12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 IGHV3-38A0A0C4DH36 116 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 SMIM2Q9BVW6 85 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 TEP1Q99973 2627 aaKnown RBP12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 NIPBLQ6KC79 2804 aaeCLIP12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 ATRQ13535 2644 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 IGKV3OR2-268A0A0C4DH90 116 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 UBE2V1Q13404 147 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
SLC27A1-201ENST00000252595 YAE1D1Q9NRH1 226 aa12.52□□□□□ -0.4
SLC27A1-201ENST00000252595 TP53TG1Q9Y2A0 90 aa12.52□□□□□ -0.4
SLC27A1-201ENST00000252595 LOC107984156A0A0G2JMH3 177 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 TRBV6-1A0A0K0K1D8 114 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 ARL17AQ8IVW1 177 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 DUSP14O95147 198 aaKnown RBP12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 GATD1Q8NB37 220 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 MEGF9Q9H1U4 602 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 LGALS9BQ3B8N2 356 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 LGALS9CQ6DKI2 356 aa12.51□□□□□ -0.41
SLC27A1-201ENST00000252595 GPHB5Q86YW7 130 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms