RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 RASL10AQ92737 203 aa16.32■□□□□ 0.2
SH2D3A-201ENST00000245908 PHLDA3Q9Y5J5 127 aa16.32■□□□□ 0.2
SH2D3A-201ENST00000245908 TSSC4Q9Y5U2 329 aaPredicted RBP16.32■□□□□ 0.2
SH2D3A-201ENST00000245908 A0A087WX48 190 aa16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 F8W1H4 67 aa16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 GCSHP23434 173 aa16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 GTSCR1Q86UQ5 136 aa16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 C20orf78Q9BR46 151 aa16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 SPANXB1Q9NS25 103 aaPredicted RBP16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 VPS13CQ709C8 3753 aa16.31■□□□□ 0.2
SH2D3A-201ENST00000245908 SPRY2O43597 315 aa16.3■□□□□ 0.2
SH2D3A-201ENST00000245908 SUMO2P61956 95 aaKnown RBP16.3■□□□□ 0.2
SH2D3A-201ENST00000245908 TMEM160Q9NX00 188 aa16.3■□□□□ 0.2
SH2D3A-201ENST00000245908 ORMDL2Q53FV1 153 aa16.3■□□□□ 0.2
SH2D3A-201ENST00000245908 TTTY13Q9BZ97 58 aa16.3■□□□□ 0.2
SH2D3A-201ENST00000245908 ZNF580Q9UK33 172 aa16.3■□□□□ 0.2
SH2D3A-201ENST00000245908 IGKV3-7A0A075B6H7 116 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 AVPP01185 164 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 C14orf178Q8N769 122 aaPredicted RBP16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 CLUHP3Q96NS8 147 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 CHAC1Q9BUX1 264 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 SPTAN1Q13813 2472 aaKnown RBP16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 CELSR1Q9NYQ6 3014 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 K7EMT4 169 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 RNASE3P12724 160 aaKnown RBP16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 SLC25A16P16260 332 aa16.29■□□□□ 0.2
SH2D3A-201ENST00000245908 TRAV12-1A0A0B4J245 112 aa16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 B4DSR2 109 aa16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 K7EMI3 77 aa16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 TM2D2Q9BX73 214 aa16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 E9PLD3 99 aa16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 GNRH2O43555 120 aa16.28■□□□□ 0.2
SH2D3A-201ENST00000245908 RNF223E7ERA6 249 aa16.27■□□□□ 0.2
SH2D3A-201ENST00000245908 NXPH4O95158 308 aa16.27■□□□□ 0.2
SH2D3A-201ENST00000245908 PLNP26678 52 aa16.27■□□□□ 0.2
SH2D3A-201ENST00000245908 TOMM6Q96B49 74 aa16.27■□□□□ 0.2
SH2D3A-201ENST00000245908 RPL39LQ96EH5 51 aaKnown RBP16.27■□□□□ 0.2
SH2D3A-201ENST00000245908 TRBV25-1A0A075B6N4 114 aa16.26■□□□□ 0.19
SH2D3A-201ENST00000245908 KLLNB2CW77 178 aa16.26■□□□□ 0.19
SH2D3A-201ENST00000245908 K7ERJ3 54 aa16.26■□□□□ 0.19
SH2D3A-201ENST00000245908 POM121L12Q8N7R1 296 aa16.26■□□□□ 0.19
SH2D3A-201ENST00000245908 MGPP08493 103 aa16.25■□□□□ 0.19
SH2D3A-201ENST00000245908 TCTEX1D4Q5JR98 221 aa16.25■□□□□ 0.19
SH2D3A-201ENST00000245908 EDN2P20800 178 aa16.25■□□□□ 0.19
SH2D3A-201ENST00000245908 F8VRH5 84 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 H7C1H1 209 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 SRD5A1P18405 259 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 GATA3P23771 443 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 ID1P41134 155 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 WFDC2Q14508 124 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 CEND1Q8N111 149 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 DCANP1Q8TF63 244 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 PSMB8P28062 276 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 TMEM95Q3KNT9 176 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 SCGB3A1Q96QR1 104 aa16.24■□□□□ 0.19
SH2D3A-201ENST00000245908 PPP1R17O96001 155 aa16.23■□□□□ 0.19
SH2D3A-201ENST00000245908 NHP2Q9NX24 153 aaKnown RBP16.23■□□□□ 0.19
SH2D3A-201ENST00000245908 IGLL5B9A064 214 aa16.22■□□□□ 0.19
SH2D3A-201ENST00000245908 PKD1L2Q7Z442 2459 aa16.22■□□□□ 0.19
SH2D3A-201ENST00000245908 DSCR9P59020 149 aa16.22■□□□□ 0.19
SH2D3A-201ENST00000245908 SPAG8Q99932 426 aaPredicted RBP16.22■□□□□ 0.19
SH2D3A-201ENST00000245908 KIF25-AS1Q9Y6Z4 181 aa16.22■□□□□ 0.19
SH2D3A-201ENST00000245908 MAPKAPK5-AS1Q8N8E1 139 aa16.21■□□□□ 0.19
SH2D3A-201ENST00000245908 NEXN-AS1Q8NBZ9 246 aa16.21■□□□□ 0.19
SH2D3A-201ENST00000245908 CKS1BP61024 79 aa16.21■□□□□ 0.19
SH2D3A-201ENST00000245908 MUC4Q99102 2169 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 LINC00315P59091 139 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 SCGB2A2Q13296 93 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 TAL2Q16559 108 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 IGHV4-59P01825 116 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 FAM159AQ6UWV7 190 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 C2orf66Q6UXQ4 117 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 ZNF479Q96JC4 524 aa16.2■□□□□ 0.18
SH2D3A-201ENST00000245908 DEFB112Q30KQ8 113 aa16.19■□□□□ 0.18
SH2D3A-201ENST00000245908 TMEM89A2RUT3 159 aa16.19■□□□□ 0.18
SH2D3A-201ENST00000245908 IGHV4OR15-8A0A075B7B6 117 aa16.18■□□□□ 0.18
SH2D3A-201ENST00000245908 A0A087WW49 117 aa16.18■□□□□ 0.18
SH2D3A-201ENST00000245908 RPL32P62910 135 aaKnown RBP16.18■□□□□ 0.18
SH2D3A-201ENST00000245908 BAALCQ8WXS3 180 aa16.17■□□□□ 0.18
SH2D3A-201ENST00000245908 ETDBQ3ZM63 59 aa16.17■□□□□ 0.18
SH2D3A-201ENST00000245908 ODF3Q96PU9 254 aa16.17■□□□□ 0.18
SH2D3A-201ENST00000245908 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.17■□□□□ 0.18
SH2D3A-201ENST00000245908 SH2D6Q7Z4S9 175 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 LINC01356Q8N9X3 169 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 H3BMG7 143 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 GAGE13Q4V321 117 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 C10orf99Q6UWK7 81 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 NRGNQ92686 78 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 PRO0461Q9UI25 63 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 COL12A1Q99715 3063 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 DOPEY1Q5JWR5 2465 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 CFAP46Q8IYW2 2715 aa16.16■□□□□ 0.18
SH2D3A-201ENST00000245908 C12orf74Q32Q52 190 aa16.15■□□□□ 0.18
SH2D3A-201ENST00000245908 Q5PR19 223 aa16.15■□□□□ 0.18
SH2D3A-201ENST00000245908 TRAV12-3A0A0B4J271 114 aa16.15■□□□□ 0.18
SH2D3A-201ENST00000245908 WFDC12Q8WWY7 111 aa16.14■□□□□ 0.17
SH2D3A-201ENST00000245908 CD7P09564 240 aa16.14■□□□□ 0.17
SH2D3A-201ENST00000245908 SUMO4Q6EEV6 95 aa16.14■□□□□ 0.17
SH2D3A-201ENST00000245908 JPT2Q9H910 190 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms