RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 KRTAP4-6Q9BYQ5 205 aa9.69□□□□□ -0.86
GPN3-201ENST00000228827 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
GPN3-201ENST00000228827 UBE2G1P62253 170 aa9.68□□□□□ -0.86
GPN3-201ENST00000228827 DMRTA1Q5VZB9 504 aa9.68□□□□□ -0.86
GPN3-201ENST00000228827 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
GPN3-201ENST00000228827 ZC2HC1AQ96GY0 325 aa9.68□□□□□ -0.86
GPN3-201ENST00000228827 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
GPN3-201ENST00000228827 PCLOQ9Y6V0 5065 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 HMSDA8MTL9 139 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 B4DEV8 164 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 M0R036 132 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 BCL2L11O43521 198 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 ASIPP42127 132 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 CRIP1P50238 77 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 KRTAP10-2P60368 255 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 Q6ZRN7 208 aaPredicted RBP9.67□□□□□ -0.86
GPN3-201ENST00000228827 PRADC1Q9BSG0 188 aa9.67□□□□□ -0.86
GPN3-201ENST00000228827 TRAV9-2A0A087WT02 112 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 A0A0D9SG52 128 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 KANTRA0A1W2PQU2 76 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 PAGE4O60829 102 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 SH2D1AO60880 128 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 SEC11BP0C7V7 166 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 RHOHQ15669 191 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 LGALSLQ3ZCW2 172 aaPredicted RBP9.66□□□□□ -0.86
GPN3-201ENST00000228827 SFT2D1Q8WV19 159 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 FMC1Q96HJ9 113 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 ZFP30Q9Y2G7 519 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 GRIFINA4D1Z8 144 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 H3BVH4 76 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 EVI2AP22794 236 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 AKR1C3P42330 323 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 SH2D6Q7Z4S9 175 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 PTH2Q96A98 100 aa9.66□□□□□ -0.86
GPN3-201ENST00000228827 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 TRBV6-4A0A1B0GX49 114 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 UMAD1C9J7I0 102 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 KRBOX1C9JBD0 128 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 CIDEAO60543 219 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 PFDN1O60925 122 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 CRYGDP07320 174 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 DNAH10OSP0CZ25 163 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 FAM162BQ5T6X4 162 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 PARLQ9H300 379 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 JPT2Q9H910 190 aa9.65□□□□□ -0.87
GPN3-201ENST00000228827 LTAP01374 205 aa9.64□□□□□ -0.87
GPN3-201ENST00000228827 MGST1P10620 155 aaKnown RBP9.64□□□□□ -0.87
GPN3-201ENST00000228827 Q6ZSN1 163 aa9.64□□□□□ -0.87
GPN3-201ENST00000228827 TMUB2Q71RG4 321 aa9.64□□□□□ -0.87
GPN3-201ENST00000228827 MBD3L1Q8WWY6 194 aa9.64□□□□□ -0.87
GPN3-201ENST00000228827 TCEAL7Q9BRU2 100 aa9.64□□□□□ -0.87
GPN3-201ENST00000228827 MSRB1Q9NZV6 116 aa9.64□□□□□ -0.87
GPN3-201ENST00000228827 SCO2A0A1W2PP80 73 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 A8MWV9 139 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 ARMS2P0C7Q2 107 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 FUSP35637 526 aaKnown RBP eCLIP9.63□□□□□ -0.87
GPN3-201ENST00000228827 OR10J3Q5JRS4 329 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 NFE4Q86UQ8 179 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 SAMD10Q9BYL1 202 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 IL36BQ9NZH7 164 aa9.63□□□□□ -0.87
GPN3-201ENST00000228827 DNAH5Q8TE73 4624 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 GAGE12JA6NER3 117 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 H2AFB1P0C5Y9 115 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 TIRAPP58753 221 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 EIF5AP63241 154 aaKnown RBP9.62□□□□□ -0.87
GPN3-201ENST00000228827 GAGE1Q13065 139 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 GAGE4Q13068 117 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 GAGE5Q13069 117 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 ZNF674Q2M3X9 581 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 GAGE13Q4V321 117 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 COX8CQ7Z4L0 72 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
GPN3-201ENST00000228827 HSPG2P98160 4391 aa9.61□□□□□ -0.87
GPN3-201ENST00000228827 IGHV3-38A0A0C4DH36 116 aa9.61□□□□□ -0.87
GPN3-201ENST00000228827 EREGO14944 169 aa9.61□□□□□ -0.87
GPN3-201ENST00000228827 TPT1P13693 172 aaKnown RBP9.61□□□□□ -0.87
GPN3-201ENST00000228827 ZFP2Q6ZN57 461 aa9.61□□□□□ -0.87
GPN3-201ENST00000228827 SYT8Q8NBV8 401 aa9.61□□□□□ -0.87
GPN3-201ENST00000228827 K7EP13 123 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 CDK2AP2O75956 126 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 IGHV3-30P01768 117 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 IGHV3-33P01772 117 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 IGHV3-30-3P0DP02 117 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 IGHV3-30-5P0DP03 117 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 LINC01559Q495D7 138 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 FAM74A4Q5TZK3 123 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 C10orf126Q8N4M7 172 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
GPN3-201ENST00000228827 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 Q9UF83 564 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 PHLDA3Q9Y5J5 127 aa9.6□□□□□ -0.87
GPN3-201ENST00000228827 APOBP04114 4563 aaKnown RBP9.6□□□□□ -0.87
GPN3-201ENST00000228827 A0A087WWL8 130 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 M0R381 172 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 DNLZQ5SXM8 178 aa9.59□□□□□ -0.87
GPN3-201ENST00000228827 LELP1Q5T871 98 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms