RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 Q0VG73 95 aa8.22□□□□□ -1.09
TRPS1-201ENST00000220888 GTSF1Q8WW33 167 aa8.22□□□□□ -1.09
TRPS1-201ENST00000220888 C17orf77Q96MU5 243 aa8.22□□□□□ -1.09
TRPS1-201ENST00000220888 SEM1Q6ZVN7 128 aa8.21□□□□□ -1.09
TRPS1-201ENST00000220888 SBF2Q86WG5 1849 aa8.21□□□□□ -1.09
TRPS1-201ENST00000220888 ZGRF1Q86YA3 2104 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 NYNRINQ9P2P1 1898 aaKnown RBP8.21□□□□□ -1.1
TRPS1-201ENST00000220888 LTAP01374 205 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 LYL1P12980 280 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 THSD7BQ9C0I4 1608 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 COLCA2A8K830 154 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 K7EMI3 77 aa8.21□□□□□ -1.1
TRPS1-201ENST00000220888 SONP18583 2426 aaKnown RBP8.2□□□□□ -1.1
TRPS1-201ENST00000220888 K7EMT4 169 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 SPAG11BQ08648 103 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 C16orf54Q6UWD8 224 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 PRORYQ9H606 182 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 LGALS9BQ3B8N2 356 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 LGALS9CQ6DKI2 356 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 PRO0255Q9UI72 69 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 DEFB125Q8N687 156 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 Q8N9W7 124 aa8.2□□□□□ -1.1
TRPS1-201ENST00000220888 OPRPNQ99935 248 aaPredicted RBP8.2□□□□□ -1.1
TRPS1-201ENST00000220888 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 TICRRQ7Z2Z1 1910 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 FHL1Q13642 323 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 CXCL5P42830 114 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 MP68P56378 58 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 IGLV11-55A0A075B6I3 123 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 SND1-IT1Q9HBX3 110 aa8.19□□□□□ -1.1
TRPS1-201ENST00000220888 TNCP24821 2201 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 XIRP1Q702N8 1843 aaKnown RBP8.18□□□□□ -1.1
TRPS1-201ENST00000220888 WNK3Q9BYP7 1800 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 SMIM27A0A1W2PRY6 76 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 KIR2DL5BQ8NHK3 375 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 GREB1LQ9C091 1923 aaPredicted RBP8.18□□□□□ -1.1
TRPS1-201ENST00000220888 C9JQL5 133 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 IGHG2P01859 326 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 PPDPFLQ8WWR9 84 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 SPANXDQ9BXN6 97 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 GTSF1LQ9H1H1 148 aa8.18□□□□□ -1.1
TRPS1-201ENST00000220888 H3BQ85 93 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 WFDC11Q8NEX6 87 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 V9GYV3 84 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 CTSGP08311 255 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 PRR20EP86478 221 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 PRR20CP86479 221 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 PRR20DP86480 221 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 PRR20BP86481 221 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 PRR20AP86496 221 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 C11orf53Q8IXP5 236 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 KIAA1671Q9BY89 1806 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 NCR3O14931 201 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 BAALC-AS2P0C853 105 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 NREPQ16612 68 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 C20orf144Q9BQM9 153 aa8.17□□□□□ -1.1
TRPS1-201ENST00000220888 A0A1B0GX51 115 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 PRSS47A8MTI9 375 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 OTOGLQ3ZCN5 2332 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 DEFB131BA0A096LNP1 70 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 SEC61GP60059 68 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 FBXL19-AS1Q494R0 122 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 TMEM61Q8N0U2 210 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 Q8N1Y9 231 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 C7orf33Q8WU49 177 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 TMEM263Q8WUH6 116 aaKnown RBP8.16□□□□□ -1.1
TRPS1-201ENST00000220888 H0YGX0 51 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 I3L2K1 104 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 K7EIM0 57 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 RSPO1Q2MKA7 263 aaPredicted RBP8.16□□□□□ -1.1
TRPS1-201ENST00000220888 ZFP2Q6ZN57 461 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 SIPA1L1O43166 1804 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 BAALCQ8WXS3 180 aa8.16□□□□□ -1.1
TRPS1-201ENST00000220888 C1orf147Q96MC9 270 aaPredicted RBP8.16□□□□□ -1.1
TRPS1-201ENST00000220888 H0Y9J4 135 aa8.15□□□□□ -1.1
TRPS1-201ENST00000220888 IL15RAQ13261 267 aa8.15□□□□□ -1.1
TRPS1-201ENST00000220888 C5orf47Q569G3 176 aa8.15□□□□□ -1.1
TRPS1-201ENST00000220888 PCNX2A6NKB5 2137 aa8.15□□□□□ -1.1
TRPS1-201ENST00000220888 IFITM1P13164 125 aa8.15□□□□□ -1.1
TRPS1-201ENST00000220888 DOCK9Q9BZ29 2069 aa8.15□□□□□ -1.1
TRPS1-201ENST00000220888 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.11
TRPS1-201ENST00000220888 TMEM258P61165 79 aa8.15□□□□□ -1.11
TRPS1-201ENST00000220888 DIRC1Q969H9 104 aa8.15□□□□□ -1.11
TRPS1-201ENST00000220888 CITED1Q99966 193 aa8.15□□□□□ -1.11
TRPS1-201ENST00000220888 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.11
TRPS1-201ENST00000220888 A6NDX4 124 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 CEND1Q8N111 149 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 RPL39LQ96EH5 51 aaKnown RBP8.14□□□□□ -1.11
TRPS1-201ENST00000220888 CUL9Q8IWT3 2517 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 A0A087WZ39 114 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 CRYGDP07320 174 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 CRYBA4P53673 196 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 C11orf52Q96A22 123 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 DYSFO75923 2080 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 TRAV26-1A0A087WT03 109 aa8.14□□□□□ -1.11
TRPS1-201ENST00000220888 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms