RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 CARHSP1Q9Y2V2 147 aaKnown RBP9.41□□□□□ -0.9
TIMP1-201ENST00000218388 F2Z2F3 143 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 SNAI2O43623 268 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 MT-ND4LP03901 98 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 OR5AL1P0C617 328 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 DEFB130BP0DP73 79 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 DEFB130AP0DP74 79 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 ZFP82Q8N141 532 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 PTH2Q96A98 100 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 MRPL16Q9NX20 251 aaKnown RBP9.4□□□□□ -0.9
TIMP1-201ENST00000218388 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
TIMP1-201ENST00000218388 TRGV2A0A075B6R0 118 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 GAGE12BA1L429 117 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 GAGE7O76087 117 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 GZMBP10144 247 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 ZNF876PQ49A33 203 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 PIK3CD-AS1Q5SR53 167 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 Q6ZTI0 123 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 TSKUQ8WUA8 353 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 RASL10AQ92737 203 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
TIMP1-201ENST00000218388 SCRT2Q9NQ03 307 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 V9GYV3 84 aa9.39□□□□□ -0.91
TIMP1-201ENST00000218388 NANOS2P60321 138 aaKnown RBP9.38□□□□□ -0.91
TIMP1-201ENST00000218388 CACNG7P62955 275 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 C12orf74Q32Q52 190 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 RNF212Q495C1 297 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 ZNF575Q86XF7 245 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 SVBPQ8N300 66 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 C18orf15Q96N68 181 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
TIMP1-201ENST00000218388 M0R381 172 aa9.37□□□□□ -0.91
TIMP1-201ENST00000218388 APOC3P02656 99 aa9.37□□□□□ -0.91
TIMP1-201ENST00000218388 CTRLP40313 264 aa9.37□□□□□ -0.91
TIMP1-201ENST00000218388 RHEBQ15382 184 aa9.37□□□□□ -0.91
TIMP1-201ENST00000218388 STAB2Q8WWQ8 2551 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 MUC4Q99102 2169 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 TRAV4A0A0B4J268 109 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 A8MWV9 139 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 SNAPINO95295 136 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 ATP5G1P05496 136 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 FOXA3P55318 350 aaPredicted RBP9.36□□□□□ -0.91
TIMP1-201ENST00000218388 WDR73Q6P4I2 378 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 LYZL1Q6UWQ5 148 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 Q6ZTC4 211 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 OR10AG1Q8NH19 301 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 GTSF1Q8WW33 167 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
TIMP1-201ENST00000218388 TRAV10A0A0B4J240 114 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 HIGD1CA8MV81 97 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 CIDEAO60543 219 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 NXPH4O95158 308 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 OR4C5Q8NGB2 326 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 PGLYRP4Q96LB8 373 aa9.35□□□□□ -0.91
TIMP1-201ENST00000218388 IGHV4-4A0A075B6R2 117 aa9.34□□□□□ -0.91
TIMP1-201ENST00000218388 HTN3P15516 51 aa9.34□□□□□ -0.91
TIMP1-201ENST00000218388 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
TIMP1-201ENST00000218388 CNFNQ9BYD5 112 aa9.34□□□□□ -0.91
TIMP1-201ENST00000218388 A0A087WWC5 75 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 DEFB131BA0A096LNP1 70 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 MUC21A0A0G2JKD1 596 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 MUC21A0A140T8X8 626 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 C7orf77A4D0Y5 90 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 RHODO00212 210 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 RS1O15537 224 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 TRGC1P0CF51 173 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 SMIM17P0DL12 118 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 SSTP61278 116 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 TWIST1Q15672 202 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 MUC7Q8TAX7 377 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 PHLDA1Q8WV24 401 aaPredicted RBP9.33□□□□□ -0.92
TIMP1-201ENST00000218388 RPS10P5Q9NQ39 176 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 TMEM242Q9NWH2 141 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 TGP01266 2768 aa9.33□□□□□ -0.92
TIMP1-201ENST00000218388 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 NUPR2A6NF83 97 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 F5H768 121 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 IGHV3-53P01767 116 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 NTF3P20783 257 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 SLAQ13239 276 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 RIGQ13278 110 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 CFAP126Q5VTH2 177 aa9.32□□□□□ -0.92
TIMP1-201ENST00000218388 KCNIP4Q6PIL6 250 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms