RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 SRSF1Q07955 248 aaKnown RBP eCLIP11.97□□□□□ -0.49
SNAPC1-201ENST00000216294 ZFAND2AQ8N6M9 145 aa11.97□□□□□ -0.49
SNAPC1-201ENST00000216294 ARL6IP6Q8N6S5 226 aa11.97□□□□□ -0.49
SNAPC1-201ENST00000216294 LRRK2Q5S007 2527 aa11.97□□□□□ -0.49
SNAPC1-201ENST00000216294 NOTCH3Q9UM47 2321 aa11.97□□□□□ -0.49
SNAPC1-201ENST00000216294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.96□□□□□ -0.49
SNAPC1-201ENST00000216294 ATP5LO75964 103 aa11.96□□□□□ -0.49
SNAPC1-201ENST00000216294 SCGB3A1Q96QR1 104 aa11.96□□□□□ -0.49
SNAPC1-201ENST00000216294 SMIM2Q9BVW6 85 aa11.96□□□□□ -0.49
SNAPC1-201ENST00000216294 UBR5O95071 2799 aaPredicted RBP11.96□□□□□ -0.49
SNAPC1-201ENST00000216294 NDUFS8O00217 210 aa11.96□□□□□ -0.5
SNAPC1-201ENST00000216294 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.5
SNAPC1-201ENST00000216294 BLCAPP62952 87 aa11.96□□□□□ -0.5
SNAPC1-201ENST00000216294 KLHL30-AS1Q8NEE0 82 aa11.96□□□□□ -0.5
SNAPC1-201ENST00000216294 AKAP9Q99996 3911 aa11.96□□□□□ -0.5
SNAPC1-201ENST00000216294 IGHV1-69DA0A0B4J2H0 117 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 IGLL5B9A064 214 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 IGHV1-69P01742 117 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 PIFOQ8TCI5 191 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 PHLDA3Q9Y5J5 127 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 C12orf74Q32Q52 190 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 TMEM190Q8WZ59 177 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 U3KQE9 123 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 MYO9AB2RTY4 2548 aa11.95□□□□□ -0.5
SNAPC1-201ENST00000216294 TLN2Q9Y4G6 2542 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 TRBV7-1A0A0A6YYK4 115 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 IGKV3-20P01619 116 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 HIGD1BQ9P298 99 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 CHTOPQ9Y3Y2 248 aaKnown RBP11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 PRSS29PA6NIE9 313 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 SUMO2P61956 95 aaKnown RBP11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 TMEM95Q3KNT9 176 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 PLEKHB2Q96CS7 222 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 A0A087WWL8 130 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 INSL3P51460 131 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 TM2D2Q9BX73 214 aa11.94□□□□□ -0.5
SNAPC1-201ENST00000216294 DUSP14O95147 198 aaKnown RBP11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 RAB9AP51151 201 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 ZNF479Q96JC4 524 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 SETD2Q9BYW2 2564 aaPredicted RBP11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 PF4V1P10720 104 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 ETDBQ3ZM63 59 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 CD300EQ496F6 205 aaPredicted RBP11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 C2orf66Q6UXQ4 117 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 OR5A1Q8NGJ0 315 aa11.93□□□□□ -0.5
SNAPC1-201ENST00000216294 NACAE9PAV3 2078 aa11.92□□□□□ -0.5
SNAPC1-201ENST00000216294 MSMBP08118 114 aa11.92□□□□□ -0.5
SNAPC1-201ENST00000216294 RPL39P62891 51 aaKnown RBP11.92□□□□□ -0.5
SNAPC1-201ENST00000216294 F8VRH5 84 aa11.92□□□□□ -0.5
SNAPC1-201ENST00000216294 COX6B1P14854 86 aa11.92□□□□□ -0.5
SNAPC1-201ENST00000216294 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
SNAPC1-201ENST00000216294 TMEM238C9JI98 176 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 H7C1H1 209 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 RNASE3P12724 160 aaKnown RBP11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 NIPBLQ6KC79 2804 aaeCLIP11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 OR10J6PQ8NGY7 276 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 SMPXQ9UHP9 88 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 E9PLD3 99 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 HLA-DRB4P13762 266 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 C10orf99Q6UWK7 81 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 HLA-DRB4X5D2U9 266 aa11.91□□□□□ -0.5
SNAPC1-201ENST00000216294 OR11H12B2RN74 326 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 SLC25A16P16260 332 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 NEXN-AS1Q8NBZ9 246 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 OR11H1Q8NG94 326 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 OR11H2Q8NH07 326 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 ANKRD17O75179 2603 aaKnown RBP11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 AVPP01185 164 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 LGALS1P09382 135 aaKnown RBP11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 ASIPP42127 132 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 PRADC1Q9BSG0 188 aa11.9□□□□□ -0.5
SNAPC1-201ENST00000216294 ABCA12Q86UK0 2595 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 TRBV7-3A0A075B6L6 115 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 H3BUX3 64 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 TGFAP01135 160 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 MAPK1IP1LQ8NDC0 245 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 MOB4Q9Y3A3 225 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 NF1P21359 2839 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 IGHV4-4A0A075B6R2 117 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 MYMXA0A1B0GTQ4 84 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 SOCS3O14543 225 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 TOMM6Q96B49 74 aa11.89□□□□□ -0.51
SNAPC1-201ENST00000216294 TEX15Q9BXT5 2789 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 TRAV12-2A0A075B6T6 113 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 PLNP26678 52 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 OPRPNQ99935 248 aaPredicted RBP11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 RHPN1-AS1Q9BWJ2 59 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 DPH3P1Q9H4G8 78 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 TSSC4Q9Y5U2 329 aaPredicted RBP11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 TRAV12-3A0A0B4J271 114 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 TSHBP01222 138 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 SMAGPQ0VAQ4 97 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 SCGB2A2Q13296 93 aa11.88□□□□□ -0.51
SNAPC1-201ENST00000216294 ZNF815PA8K554 130 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms