RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Mogat1Q91ZV4 335 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 MmdQ9CQY7 238 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Mettl9Q9EPL4 318 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gab2Q9Z1S8 665 aa16.94■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm45783A0A1B0GT48 74 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 ErhP84089 104 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Sft2d1Q5SSN7 159 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Errfi1Q99JZ7 461 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Rpusd4Q9CWX4 377 aaKnown RBP16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 AcanQ61282 2132 aaKnown RBP16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 AsmtD3KU66 387 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm17455G3UW87 128 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Ifitm7G3X9Z2 141 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Cldn34c3J3QJW5 233 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Cldn34c2J3QNM1 233 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Tmem18Q3TUD9 140 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Cldn34c1Q8K193 234 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1202Q8VF98 309 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr346Q8VGJ7 309 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Tsc22d3Q9Z2S7 137 aa16.93■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 F5O88783 2183 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1248A0A1L1SSZ5 307 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Vmn1r113G3UWI8 307 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Rnf150Q5DTZ6 437 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr328Q5NCD3 310 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 BsxQ810B3 232 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Parp11Q8CFF0 331 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Rab11fip5Q8R361 645 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr1086Q8VFL9 310 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr473Q8VG44 310 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Tmem51Q99LG1 249 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 BambiQ9D0L6 260 aa16.92■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Mgst2A2RST1 147 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Hyal2O35632 473 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 BC049762Q8C601 163 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Commd9Q8K2Q0 198 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Pttg1ipQ8R143 174 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 AmtnQ9D3J8 213 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Hspb9Q9DAM3 168 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Opn3Q9WUK7 400 aa16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Prpf8Q99PV0 2335 aaKnown RBP16.91■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Chd6A3KFM7 2711 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Ighv14-4A0A0A6YVR1 117 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 PhyhO35386 338 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Ifitm5O88728 134 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gnb1P62874 340 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gm9733Q1AN91 178 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Q8BN57 294 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Sft2d2Q8VD57 159 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr491Q8VG06 310 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Gng13Q9JMF3 67 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Olfr211Q8VGH2 309 aa16.9■□□□□ 0.3
Ccdc88a-202ENSMUST00000109477 Zfp980A2A9J5 645 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Frrs1lB1AXV0 293 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr747E9PXH6 313 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr231E9Q0M4 307 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 P06323 132 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Fgf7P36363 194 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Defb30Q30KN4 75 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 CenptQ3TJM4 515 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr1173Q7TR24 312 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr1042Q7TR81 313 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr1271Q8VG62 305 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 4933414I15RikQ9D4D5 133 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Srp19Q9D7A6 144 aa16.89■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Fgf4P11403 202 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 GbaP17439 515 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Serf2P84102 59 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Wdr83osQ6ZWX0 106 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 9230109A22RikQ8BHE6 111 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Poc1aQ8JZX3 405 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Vmn1r50Q9EP51 310 aa16.88■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Zfp109A0A0U1RPC5 652 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Zfp972A2AW65 139 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Vmn1r78K7N608 313 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Cdkn2aQ64364 169 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Cd200r4Q6XJV4 270 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 C730034F03RikQ8BGL5 111 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Nit1Q8VDK1 323 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Insig2Q91WG1 225 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Elovl6Q920L5 267 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Bhlha15Q9QYC3 197 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Prrc2aQ7TSC1 2158 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Prkar2aP12367 401 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Lgals3P16110 264 aaKnown RBP16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Tmem205Q91XE8 189 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Spink12Q9D256 87 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Mixl1Q9WUI0 231 aa16.87■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Trav4-2A0A075B638 110 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Trbv5A0A0B4J1G9 113 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Vmn1r160E9Q346 307 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Vmn1r123L7N270 307 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Cela2aP05208 271 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Angptl6Q8R0Z6 457 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Olfr960Q8VET5 316 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Ssbp2Q9CYZ8 361 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 CompQ9R0G6 755 aa16.86■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 9530053A07RikE9PVG8 2581 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Ighv8-9A0A0G2JET1 119 aa16.85■□□□□ 0.29
Ccdc88a-202ENSMUST00000109477 Tmem29A2ANF5 204 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms