RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 IGHV3-30-5P0DP03 117 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 FGF7P21781 194 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 S100A11P31949 105 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 LINC01620Q4KN68 170 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 LELP1Q5T871 98 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 MZT2BQ6NZ67 158 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 TMEM252Q8N6L7 170 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 SLC25A29Q8N8R3 303 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 CHAC1Q9BUX1 264 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 GPN1Q9HCN4 374 aaPredicted RBP5.64□□□□□ -1.51
LINC00339-212ENST00000642072 LSM5Q9Y4Y9 91 aaKnown RBP5.64□□□□□ -1.51
LINC00339-212ENST00000642072 LENEPQ9Y5L5 61 aa5.64□□□□□ -1.51
LINC00339-212ENST00000642072 TRAV8-6A0A0B4J262 113 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 LECT2O14960 151 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 PLA2G10O15496 165 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 GNRH2O43555 120 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 PFN1P07737 140 aaKnown RBP5.63□□□□□ -1.51
LINC00339-212ENST00000642072 OR10J4P0C629 311 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 OR10J3Q5JRS4 329 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 FAM159AQ6UWV7 190 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 DPPA3Q6W0C5 159 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 TCTE3Q8IZS6 198 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 CIRBP-AS1Q8TBR5 109 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 TMED6Q8WW62 240 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 MARVELD1Q9BSK0 173 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 TM2D2Q9BX73 214 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 OR51M1Q9H341 326 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 BOLA1Q9Y3E2 137 aa5.63□□□□□ -1.51
LINC00339-212ENST00000642072 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.62□□□□□ -1.51
LINC00339-212ENST00000642072 TRBV6-4A0A1B0GX49 114 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 DIRC3C9JPN6 131 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 TYMSP04818 313 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 LINC00694P0DN24 101 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 S100A1P23297 94 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 HBG1P69891 147 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 HBG2P69892 147 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 ATP6V1FQ16864 119 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 CFAP126Q5VTH2 177 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 TRIQKQ629K1 86 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 ENKURQ8TC29 256 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 TVP23CQ96ET8 276 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 PAXXQ9BUH6 204 aa5.62□□□□□ -1.51
LINC00339-212ENST00000642072 FBLL1A6NHQ2 334 aaKnown RBP5.61□□□□□ -1.51
LINC00339-212ENST00000642072 CENPXA8MT69 81 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 FAM25EA8MYX2 175 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 RS1O15537 224 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 LYRM1O43325 122 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 HNRNPA3P51991 378 aaKnown RBP5.61□□□□□ -1.51
LINC00339-212ENST00000642072 RANP62826 216 aaKnown RBP5.61□□□□□ -1.51
LINC00339-212ENST00000642072 IFITM2Q01629 132 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 RAB32Q13637 225 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 RHOHQ15669 191 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 ZFP69Q49AA0 526 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 STX12Q86Y82 276 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 THAP6Q8TBB0 222 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 C2orf50Q96LR7 162 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 GTSF1LQ9H1H1 148 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 NAGKQ9UJ70 344 aa5.61□□□□□ -1.51
LINC00339-212ENST00000642072 TRAV8-3A0A0A6YYJ7 113 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 FAM240BA0A1B0GVZ2 78 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 RNF222A6NCQ9 220 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 IGLV2-8P01709 118 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 PVALBP20472 110 aaPredicted RBP5.6□□□□□ -1.51
LINC00339-212ENST00000642072 CSN1S1P47710 185 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 S100A10P60903 97 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 DAZ4Q86SG3 579 aaKnown RBP5.6□□□□□ -1.51
LINC00339-212ENST00000642072 ATP6V0E2Q8NHE4 81 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 BAALCQ8WXS3 180 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 DNAJC30Q96LL9 226 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 SEC22CQ9BRL7 303 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 PRADC1Q9BSG0 188 aa5.6□□□□□ -1.51
LINC00339-212ENST00000642072 DAZ3Q9NR90 486 aaKnown RBP5.6□□□□□ -1.51
LINC00339-212ENST00000642072 TRAV21A0A0B4J279 112 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 C5orf51A6NDU8 294 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 OR7C2O60412 319 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 CIDEAO60543 219 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 INPP1P49441 399 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 UBE2L3P68036 154 aaKnown RBP5.59□□□□□ -1.51
LINC00339-212ENST00000642072 NHLH2Q02577 135 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 ZNF876PQ49A33 203 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 OR5C1Q8NGR4 320 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 DAZAP1Q96EP5 407 aaKnown RBP5.59□□□□□ -1.51
LINC00339-212ENST00000642072 C9orf85Q96MD7 179 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 C11orf21Q9P2W6 132 aa5.59□□□□□ -1.51
LINC00339-212ENST00000642072 TRAV8-1A0A0A6YYK1 113 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 IGHV3-73A0A0B4J1V6 119 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 F6UZH7 168 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 INMT-MINDY4F8WBC2 141 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 MGST1P10620 155 aaKnown RBP5.58□□□□□ -1.52
LINC00339-212ENST00000642072 ASB13Q8WXK3 278 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 PTH2Q96A98 100 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 KCNS1Q96KK3 526 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 WDR61Q9GZS3 305 aaKnown RBP5.58□□□□□ -1.52
LINC00339-212ENST00000642072 SDF2L1Q9HCN8 221 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 OTORQ9NRC9 128 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 Q9UF83 564 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 ALG5Q9Y673 324 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 COX11Q9Y6N1 276 aa5.58□□□□□ -1.52
LINC00339-212ENST00000642072 TRAV6A0A075B6T7 132 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms