RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 UBE2DNLQ8IWF7 75 aa12.11□□□□□ -0.47
PHGDH-227ENST00000641811 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-227ENST00000641811 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 A0A1B0GVG6 124 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 IGHV3-53P01767 116 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 H2AFB1P0C5Y9 115 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 SMUG1Q53HV7 270 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 ARL2-SNX15V9GYD0 113 aa12.1□□□□□ -0.47
PHGDH-227ENST00000641811 IGHV3-16A0A0C4DH30 117 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 FBLL1A6NHQ2 334 aaKnown RBP12.09□□□□□ -0.47
PHGDH-227ENST00000641811 TYMSP04818 313 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 LGALS9BQ3B8N2 356 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 Q86TA4 180 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 HIST1H2BAQ96A08 127 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 C18orf15Q96N68 181 aa12.09□□□□□ -0.47
PHGDH-227ENST00000641811 PPT1P50897 306 aa12.08□□□□□ -0.48
PHGDH-227ENST00000641811 CCL20P78556 96 aa12.08□□□□□ -0.48
PHGDH-227ENST00000641811 ZFP69Q49AA0 526 aa12.08□□□□□ -0.48
PHGDH-227ENST00000641811 SPXQ9BT56 116 aa12.08□□□□□ -0.48
PHGDH-227ENST00000641811 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
PHGDH-227ENST00000641811 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
PHGDH-227ENST00000641811 RNF212Q495C1 297 aa12.07□□□□□ -0.48
PHGDH-227ENST00000641811 C9orf62Q8N4C0 152 aa12.07□□□□□ -0.48
PHGDH-227ENST00000641811 KCNS1Q96KK3 526 aa12.07□□□□□ -0.48
PHGDH-227ENST00000641811 IGLV2-18A0A075B6J9 118 aa12.06□□□□□ -0.48
PHGDH-227ENST00000641811 M0R2N4 97 aa12.06□□□□□ -0.48
PHGDH-227ENST00000641811 SLC51BQ86UW2 128 aa12.06□□□□□ -0.48
PHGDH-227ENST00000641811 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
PHGDH-227ENST00000641811 SFTA3P0C7M3 94 aa12.05□□□□□ -0.48
PHGDH-227ENST00000641811 EIF5AL1Q6IS14 154 aaKnown RBP12.05□□□□□ -0.48
PHGDH-227ENST00000641811 RASL10AQ92737 203 aa12.05□□□□□ -0.48
PHGDH-227ENST00000641811 FMC1Q96HJ9 113 aa12.05□□□□□ -0.48
PHGDH-227ENST00000641811 MUC4Q99102 2169 aa12.05□□□□□ -0.48
PHGDH-227ENST00000641811 EPPK1P58107 5090 aaKnown RBP12.04□□□□□ -0.48
PHGDH-227ENST00000641811 SULT1A2P50226 295 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 CRIP1P50238 77 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 RAB5CP51148 216 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 UBE2G1P62253 170 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 FHL2Q14192 279 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 ZNF479Q96JC4 524 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 TCEAL7Q9BRU2 100 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 DNAH6Q9C0G6 4158 aa12.04□□□□□ -0.48
PHGDH-227ENST00000641811 NACAE9PAV3 2078 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 FABP5P3A8MUU1 101 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 M0R2P5 195 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 AKR1C3P42330 323 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 GNG13Q9P2W3 67 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 ZFP30Q9Y2G7 519 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 LINC00588Q9Y4M8 146 aa12.03□□□□□ -0.48
PHGDH-227ENST00000641811 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
PHGDH-227ENST00000641811 IGKV3D-20A0A0C4DH25 116 aa12.02□□□□□ -0.49
PHGDH-227ENST00000641811 H3BNG1 76 aa12.02□□□□□ -0.49
PHGDH-227ENST00000641811 LTAP01374 205 aa12.02□□□□□ -0.49
PHGDH-227ENST00000641811 A0A096LPF7 62 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 TRBV6-1A0A0K0K1D8 114 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 C9JCJ5 164 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 PAX4O43316 350 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
PHGDH-227ENST00000641811 CCL18P55774 89 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 NHLRC2Q8NBF2 726 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 C9orf85Q96MD7 179 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 PRO0255Q9UI72 69 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 HHLA3Q9XRX5 114 aa12.01□□□□□ -0.49
PHGDH-227ENST00000641811 TRGV4A0A0C4DH28 118 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 SH2D1AO60880 128 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 ORM1P02763 201 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 RNASE3P12724 160 aaKnown RBP12□□□□□ -0.49
PHGDH-227ENST00000641811 CRYBA4P53673 196 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 ESRGQ1W209 222 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 COX8CQ7Z4L0 72 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 OR4C5Q8NGB2 326 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 ZNRF2Q8NHG8 242 aa12□□□□□ -0.49
PHGDH-227ENST00000641811 TRAV4A0A0B4J268 109 aa11.99□□□□□ -0.49
PHGDH-227ENST00000641811 PGPEP1LA6NFU8 196 aa11.99□□□□□ -0.49
PHGDH-227ENST00000641811 B4DEV8 164 aa11.99□□□□□ -0.49
PHGDH-227ENST00000641811 M0R036 132 aa11.99□□□□□ -0.49
PHGDH-227ENST00000641811 FAM3BP58499 235 aaPredicted RBP11.99□□□□□ -0.49
PHGDH-227ENST00000641811 ZNF876PQ49A33 203 aa11.99□□□□□ -0.49
PHGDH-227ENST00000641811 MANBALQ9NQG1 85 aa11.99□□□□□ -0.49
PHGDH-227ENST00000641811 DNAH10Q8IVF4 4471 aa11.98□□□□□ -0.49
PHGDH-227ENST00000641811 KRBOX1C9JBD0 128 aa11.98□□□□□ -0.49
PHGDH-227ENST00000641811 ZNF674Q2M3X9 581 aa11.98□□□□□ -0.49
PHGDH-227ENST00000641811 FAM162BQ5T6X4 162 aa11.98□□□□□ -0.49
PHGDH-227ENST00000641811 Q6ZR54 194 aa11.98□□□□□ -0.49
PHGDH-227ENST00000641811 GRIFINA4D1Z8 144 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 TEX46H3BTG2 121 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 S100A9P06702 114 aaKnown RBP11.97□□□□□ -0.49
PHGDH-227ENST00000641811 S100A4P26447 101 aaKnown RBP11.97□□□□□ -0.49
PHGDH-227ENST00000641811 ASIPP42127 132 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 SLAQ13239 276 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 ZNF506Q5JVG8 444 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 ALKAL2Q6UX46 152 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 ZNF575Q86XF7 245 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 DERL1Q9BUN8 251 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
PHGDH-227ENST00000641811 ICOSQ9Y6W8 199 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms