RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 ODF1Q14990 250 aa12.78□□□□□ -0.36
PHGDH-223ENST00000641597 C9orf47Q6ZRZ4 202 aa12.78□□□□□ -0.36
PHGDH-223ENST00000641597 NRACQ8N912 160 aa12.78□□□□□ -0.36
PHGDH-223ENST00000641597 FOXC2Q99958 501 aa12.78□□□□□ -0.36
PHGDH-223ENST00000641597 FCER1GP30273 86 aa12.77□□□□□ -0.36
PHGDH-223ENST00000641597 SRSF2Q01130 221 aaKnown RBP12.77□□□□□ -0.36
PHGDH-223ENST00000641597 RAB37Q96AX2 223 aa12.77□□□□□ -0.36
PHGDH-223ENST00000641597 HHLA3Q9XRX5 114 aa12.77□□□□□ -0.36
PHGDH-223ENST00000641597 AVPP01185 164 aa12.77□□□□□ -0.37
PHGDH-223ENST00000641597 PF4V1P10720 104 aa12.77□□□□□ -0.37
PHGDH-223ENST00000641597 GTSCR1Q86UQ5 136 aa12.77□□□□□ -0.37
PHGDH-223ENST00000641597 ABCA12Q86UK0 2595 aa12.77□□□□□ -0.37
PHGDH-223ENST00000641597 CD5LO43866 347 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 ANKRD17O75179 2603 aaKnown RBP12.76□□□□□ -0.37
PHGDH-223ENST00000641597 PPBPP02775 128 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 ZFAND2AQ8N6M9 145 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 PRORYQ9H606 182 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 SMIM17P0DL12 118 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 S100A7P31151 101 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
PHGDH-223ENST00000641597 MUC4Q99102 2169 aa12.75□□□□□ -0.37
PHGDH-223ENST00000641597 AGRNO00468 2067 aa12.75□□□□□ -0.37
PHGDH-223ENST00000641597 A1L4Q6 167 aa12.75□□□□□ -0.37
PHGDH-223ENST00000641597 GNRH2O43555 120 aa12.75□□□□□ -0.37
PHGDH-223ENST00000641597 RBX1P62877 108 aa12.75□□□□□ -0.37
PHGDH-223ENST00000641597 NXT2Q9NPJ8 142 aaKnown RBP12.75□□□□□ -0.37
PHGDH-223ENST00000641597 RNASE4P34096 147 aaKnown RBP12.74□□□□□ -0.37
PHGDH-223ENST00000641597 C14orf178Q8N769 122 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-223ENST00000641597 Q8N8P6 123 aa12.74□□□□□ -0.37
PHGDH-223ENST00000641597 RPL39LQ96EH5 51 aaKnown RBP12.74□□□□□ -0.37
PHGDH-223ENST00000641597 CCL19Q99731 98 aa12.74□□□□□ -0.37
PHGDH-223ENST00000641597 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
PHGDH-223ENST00000641597 TMEM8BA6NDV4 472 aa12.74□□□□□ -0.37
PHGDH-223ENST00000641597 RNF151Q2KHN1 245 aa12.74□□□□□ -0.37
PHGDH-223ENST00000641597 FAM223BA6NKX1 122 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 SOCS3O14543 225 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 ATP5J2P56134 94 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 FAM223AQ8IWN6 122 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 MRPL35Q9NZE8 188 aaKnown RBP12.73□□□□□ -0.37
PHGDH-223ENST00000641597 TLN2Q9Y4G6 2542 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 PTPN13Q12923 2485 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 LINC01546A6NGU7 62 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 H3BUT2 72 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 ANXA2RQ3ZCQ2 193 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 OR1N2Q8NGR9 330 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 C10orf105Q8TEF2 133 aa12.73□□□□□ -0.37
PHGDH-223ENST00000641597 ZC2HC1BQ5TFG8 222 aa12.72□□□□□ -0.37
PHGDH-223ENST00000641597 MAPK1IP1LQ8NDC0 245 aa12.72□□□□□ -0.37
PHGDH-223ENST00000641597 HIF1ANQ9NWT6 349 aa12.72□□□□□ -0.37
PHGDH-223ENST00000641597 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
PHGDH-223ENST00000641597 PIMREGQ9BSJ6 248 aa12.72□□□□□ -0.37
PHGDH-223ENST00000641597 C9orf139Q6ZV77 190 aa12.71□□□□□ -0.37
PHGDH-223ENST00000641597 DPF1Q92782 380 aa12.71□□□□□ -0.37
PHGDH-223ENST00000641597 RHPN1-AS1Q9BWJ2 59 aa12.71□□□□□ -0.37
PHGDH-223ENST00000641597 ZNF462Q96JM2 2506 aa12.71□□□□□ -0.37
PHGDH-223ENST00000641597 TEX15Q9BXT5 2789 aa12.71□□□□□ -0.38
PHGDH-223ENST00000641597 SFTPCP11686 197 aa12.71□□□□□ -0.38
PHGDH-223ENST00000641597 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.38
PHGDH-223ENST00000641597 ZMAT4Q9H898 229 aa12.71□□□□□ -0.38
PHGDH-223ENST00000641597 K7ERJ3 54 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 IGKCP01834 107 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 NPFFR1Q9GZQ6 430 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 MYO9AB2RTY4 2548 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 IGHG2P01859 326 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 S100A4P26447 101 aaKnown RBP12.7□□□□□ -0.38
PHGDH-223ENST00000641597 LAGE3Q14657 143 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 SMIM15Q7Z3B0 74 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 MAPKAPK5-AS1Q8N8E1 139 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 OR10J6PQ8NGY7 276 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 MEGF9Q9H1U4 602 aa12.7□□□□□ -0.38
PHGDH-223ENST00000641597 A6NDX4 124 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 NDUFA4O00483 81 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 MGPP08493 103 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 FXYD2P54710 66 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 RASL10AQ92737 203 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 JPT2Q9H910 190 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 GCSHP23434 173 aa12.69□□□□□ -0.38
PHGDH-223ENST00000641597 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
PHGDH-223ENST00000641597 SEC11AP67812 179 aa12.68□□□□□ -0.38
PHGDH-223ENST00000641597 CST9LQ9H4G1 147 aa12.68□□□□□ -0.38
PHGDH-223ENST00000641597 GAGE12BA1L429 117 aa12.68□□□□□ -0.38
PHGDH-223ENST00000641597 CRIP2P52943 208 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-223ENST00000641597 HSD52Q0P140 79 aa12.68□□□□□ -0.38
PHGDH-223ENST00000641597 IGHV4-4A0A075B6R2 117 aa12.67□□□□□ -0.38
PHGDH-223ENST00000641597 CLEC2AQ6UVW9 174 aa12.67□□□□□ -0.38
PHGDH-223ENST00000641597 OR9G4Q8NGQ1 327 aa12.67□□□□□ -0.38
PHGDH-223ENST00000641597 PHLDA3Q9Y5J5 127 aa12.67□□□□□ -0.38
PHGDH-223ENST00000641597 DPM2O94777 84 aa12.67□□□□□ -0.38
PHGDH-223ENST00000641597 IGKV3-20P01619 116 aa12.67□□□□□ -0.38
PHGDH-223ENST00000641597 TRBV25-1A0A075B6N4 114 aa12.66□□□□□ -0.38
PHGDH-223ENST00000641597 MSMBP08118 114 aa12.66□□□□□ -0.38
PHGDH-223ENST00000641597 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
PHGDH-223ENST00000641597 PCP4P48539 62 aa12.66□□□□□ -0.38
PHGDH-223ENST00000641597 SMIM2Q9BVW6 85 aa12.66□□□□□ -0.38
PHGDH-223ENST00000641597 RNF223E7ERA6 249 aa12.66□□□□□ -0.38
PHGDH-223ENST00000641597 LINC00477Q96M19 166 aa12.66□□□□□ -0.38
PHGDH-223ENST00000641597 CBY1Q9Y3M2 126 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms