RNA–Protein interactions for RNA: ENST00000641053.1

SAMMSON-206, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,516 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-206ENST00000641053 IGKV1D-39P04432 117 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 IGKV1-13P0DP09 117 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 BEAN1Q3B7T3 259 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 IGFL2Q6UWQ7 119 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 NUP37Q8NFH4 326 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 UBALD1Q8TB05 177 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 DEPPQ9NTK1 212 aa7.6□□□□□ -1.19
SAMMSON-206ENST00000641053 LOC101059948A0A1B0GTJ6 334 aa7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 LYRM9A8MSI8 78 aa7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 DAZ2Q13117 558 aaKnown RBP7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 Q6JHZ5 121 aa7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 DAZ4Q86SG3 579 aaKnown RBP7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 MAPKAPK5-AS1Q8N8E1 139 aa7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 CCDC140Q96MF4 163 aa7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 DAZ3Q9NR90 486 aaKnown RBP7.59□□□□□ -1.19
SAMMSON-206ENST00000641053 TRAV41A0A0B4J266 112 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RBMY1BA6NDE4 496 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RBMY1EA6NEQ0 496 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 LINC01548A6NM66 108 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 C10orf142B7Z368 130 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 F8VRH5 84 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RBMY1DP0C7P1 496 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 ZNF883P0CG24 379 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RBMY1A1P0DJD3 496 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RBMY1CP0DJD4 496 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RBMY1FQ15415 496 aaKnown RBP7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 AGRNO00468 2067 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 LRP4O75096 1905 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 SPTBP11277 2137 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 ZZEF1O43149 2961 aa7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 RAI1Q7Z5J4 1906 aaPredicted RBP7.58□□□□□ -1.2
SAMMSON-206ENST00000641053 TRGV8A0A0C4DH27 118 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 TMEM202A6NGA9 273 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 ZNF815PA8K554 130 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 PRSS46E5RG02 174 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 SS18L1O75177 396 aaPredicted RBP7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 IGHV3-33P01772 117 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 ATP5EP2Q5VTU8 51 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 SPAG17Q6Q759 2223 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 HEATR5BQ9P2D3 2071 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 GCN1Q92616 2671 aaKnown RBP7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 TRBV7-1A0A0A6YYK4 115 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 IGHV1OR15-9A0A0B4J2B8 117 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 ZNF542PQ5EBM4 170 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 CRIP3Q6Q6R5 217 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 ZNF329Q86UD4 541 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 PLXDC1Q8IUK5 500 aa7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 ZCCHC24Q8N2G6 241 aaKnown RBP7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 SRSF12Q8WXF0 261 aaKnown RBP7.57□□□□□ -1.2
SAMMSON-206ENST00000641053 TRAV3A0A0B4J244 114 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 TRAV40A0A0B4J280 105 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 D6R8Y8 96 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 DEFA4P12838 97 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 Q1RN00 199 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 FOXL2NBQ6ZUU3 175 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 MIR17HGQ75NE6 70 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 MKXQ8IYA7 352 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 MPDZO75970 2070 aa7.56□□□□□ -1.2
SAMMSON-206ENST00000641053 ADAMTS9Q9P2N4 1935 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 TNRC6BQ9UPQ9 1833 aaKnown RBP7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 K7EMI3 77 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 NDUFS5O43920 106 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 SNRPD3P62318 126 aaKnown RBP7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 C9orf139Q6ZV77 190 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 SLC50A1Q9BRV3 221 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 TTTY13Q9BZ97 58 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 CACNA1CQ13936 2221 aa7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 DSPP15924 2871 aaKnown RBP7.55□□□□□ -1.2
SAMMSON-206ENST00000641053 HEATR1Q9H583 2144 aaKnown RBP7.54□□□□□ -1.2
SAMMSON-206ENST00000641053 H7C423 109 aa7.54□□□□□ -1.2
SAMMSON-206ENST00000641053 FOXS1O43638 330 aa7.54□□□□□ -1.2
SAMMSON-206ENST00000641053 CKS2P33552 79 aa7.54□□□□□ -1.2
SAMMSON-206ENST00000641053 FP248Q71RG6 208 aaPredicted RBP7.54□□□□□ -1.2
SAMMSON-206ENST00000641053 SPTSSAQ969W0 71 aa7.54□□□□□ -1.2
SAMMSON-206ENST00000641053 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 LOC389332A0A1B0GUA5 103 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 TIMM17BO60830 172 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 IGHV3-30P01768 117 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 IGHV3-30-5P0DP03 117 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 RNASE2P10153 161 aaKnown RBP7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 SAA4P35542 130 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 SUB1P53999 127 aaKnown RBP eCLIP7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 SPEGQ15772 3267 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 COL5A1P20908 1838 aaPredicted RBP7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 HELZ2Q9BYK8 2649 aaKnown RBP7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 ADAMTS20P59510 1910 aa7.53□□□□□ -1.2
SAMMSON-206ENST00000641053 SLC25A29Q8N8R3 303 aa7.52□□□□□ -1.2
SAMMSON-206ENST00000641053 ZNF714Q96N38 554 aa7.52□□□□□ -1.2
SAMMSON-206ENST00000641053 C6orf106Q9H6K1 298 aaPredicted RBP7.52□□□□□ -1.2
SAMMSON-206ENST00000641053 ASH1LQ9NR48 2969 aaKnown RBP7.52□□□□□ -1.2
SAMMSON-206ENST00000641053 ASXL3Q9C0F0 2248 aa7.52□□□□□ -1.21
SAMMSON-206ENST00000641053 MAST4O15021 2626 aa7.52□□□□□ -1.21
SAMMSON-206ENST00000641053 SHANK1Q9Y566 2161 aa7.52□□□□□ -1.21
SAMMSON-206ENST00000641053 IQCF6A8MYZ5 107 aa7.52□□□□□ -1.21
SAMMSON-206ENST00000641053 ZNF22P17026 224 aaPredicted RBP7.52□□□□□ -1.21
SAMMSON-206ENST00000641053 PIGYQ3MUY2 71 aa7.52□□□□□ -1.21
SAMMSON-206ENST00000641053 FAM222AQ5U5X8 452 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms