RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 EDDM3BP56851 147 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 CT83Q5H943 113 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 Q8IYB0 196 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 FAM216BQ8N7L0 139 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 IFI27L1Q96BM0 104 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 ZNF256Q9Y2P7 627 aaPredicted RBP6.23□□□□□ -1.41
RTTN-223ENST00000640931 POLEQ07864 2286 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 LRBAP50851 2863 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 SVEP1Q4LDE5 3571 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 AGRNO00468 2067 aa6.23□□□□□ -1.41
RTTN-223ENST00000640931 IGLV3-9A0A075B6K5 115 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 C17orf98A8MV24 154 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 SRRM5B3KS81 715 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 ZNF134P52741 427 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 ZNF138P52744 262 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 SLC25A48Q6ZT89 311 aaKnown RBP6.22□□□□□ -1.41
RTTN-223ENST00000640931 IL17RELQ6ZVW7 336 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 FAM90A1Q86YD7 464 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 PRSS3P2Q8NHM4 247 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 FAM19A4Q96LR4 140 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 GFRA4Q9GZZ7 299 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 AGPAT4-IT1Q9H0P7 198 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 DSCAMO60469 2012 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 LINC00473A8K010 186 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 LYNX1G3V0Z9 82 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 PROP1O75360 226 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 LHBP01229 141 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 LYNX1P0DP58 116 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 PSMB8P28062 276 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 DLX1P56177 255 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 RPL39P5Q59GN2 51 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 ZFP2Q6ZN57 461 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 FAM19A1Q7Z5A9 133 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 ZNF503Q96F45 646 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 C2orf48Q96LS8 159 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 COL6A6A6NMZ7 2263 aa6.22□□□□□ -1.41
RTTN-223ENST00000640931 A0A096LNJ9 63 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 C19orf71A6NCJ1 209 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 LINC01549A6NIU2 74 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 E7EQL1 145 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 HBDP02042 147 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 UBE2D1P51668 147 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 EFNA4P52798 201 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 TMEM155Q4W5P6 130 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 SHANK2-AS3Q9BTD1 123 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 MRPL20Q9BYC9 149 aaKnown RBP6.21□□□□□ -1.41
RTTN-223ENST00000640931 HHLA3Q9XRX5 114 aa6.21□□□□□ -1.41
RTTN-223ENST00000640931 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 TMEM178BH3BS89 294 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 K7EMI3 77 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 ATOX1O00244 68 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 EIF4EBP1Q13541 118 aaPredicted RBP6.21□□□□□ -1.42
RTTN-223ENST00000640931 ZNF56Q15929 161 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 C17orf58Q2M2W7 97 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 TMEM170BQ5T4T1 132 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 LYPD2Q6UXB3 125 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 VKORC1L1Q8N0U8 176 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 NTN5Q8WTR8 489 aaPredicted RBP6.21□□□□□ -1.42
RTTN-223ENST00000640931 BBC3Q96PG8 261 aaPredicted RBP6.21□□□□□ -1.42
RTTN-223ENST00000640931 GAFA1Q96PS6 74 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 LINC00527Q9UJ94 153 aa6.21□□□□□ -1.42
RTTN-223ENST00000640931 NPIPB11E5RHQ5 1161 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 LY6HO94772 140 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 NDUFC2O95298 119 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 COL8A2P25067 703 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 FCER1GP30273 86 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 CXCL5P42830 114 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 ADORA2A-AS1P86434 159 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 CALYQ9NYX4 217 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 SPTA1P02549 2419 aa6.2□□□□□ -1.42
RTTN-223ENST00000640931 hADV29S1A0JD25 119 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 NDUFC2-KCTD14E9PQ53 114 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 H3BMM0 161 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 CCL21O00585 134 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
RTTN-223ENST00000640931 UBE2WQ96B02 151 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 DSCR8Q96T75 97 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 RNF7Q9UBF6 113 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 DKK2Q9UBU2 259 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 TRAV3A0A0B4J244 114 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 H7C1H1 209 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 ACYP1P07311 99 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 LOXL3P58215 753 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 TWIST1Q15672 202 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 CCL17Q92583 94 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 RPP21Q9H633 154 aaKnown RBP6.19□□□□□ -1.42
RTTN-223ENST00000640931 TPSG1Q9NRR2 321 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 ITPR1Q14643 2758 aa6.19□□□□□ -1.42
RTTN-223ENST00000640931 VPS13CQ709C8 3753 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 COL12A1Q99715 3063 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.18□□□□□ -1.42
RTTN-223ENST00000640931 WI2-2373I1.2A0A1W2PRP0 233 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 C17orf100A8MU93 164 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 EPM2AB3EWF7 344 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 CCL3L1P16619 93 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 SRSF9Q13242 221 aaKnown RBP eCLIP6.18□□□□□ -1.42
RTTN-223ENST00000640931 DEFB121Q5J5C9 76 aa6.18□□□□□ -1.42
RTTN-223ENST00000640931 NUP37Q8NFH4 326 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms