RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 MRPL53Q96EL3 112 aaKnown RBP5.07□□□□□ -1.6
SCARB2-226ENST00000640916 A0A087WYN8 130 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 SMIM31A0A1B0GVY4 71 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 TRBV6-4A0A1B0GX49 114 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 WRBO00258 174 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 HPGDSO60760 199 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 UBE2MP61081 183 aaKnown RBP5.06□□□□□ -1.6
SCARB2-226ENST00000640916 SLC38A11Q08AI6 406 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 TMEM183BQ1AE95 376 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 SPANXN5Q5MJ07 72 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 DPPA3Q6W0C5 159 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 TMEM183AQ8IXX5 376 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 SRRQ9GZT4 340 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 ZNF492Q9P255 531 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 Q9UF83 564 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 KLK12Q9UKR0 248 aa5.06□□□□□ -1.6
SCARB2-226ENST00000640916 IGKV2-40A0A087WW87 121 aaPredicted RBP5.05□□□□□ -1.6
SCARB2-226ENST00000640916 SMCO3A2RU48 225 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 FABP12A6NFH5 140 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 FAM25AB3EWG3 89 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 FAM25CB3EWG5 89 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 FAM25GB3EWG6 89 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 B5MCH6 92 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 H3BP45 60 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 M0R2P5 195 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 SYNGR2O43760 224 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 IGKV2D-40P01614 121 aaPredicted RBP5.05□□□□□ -1.6
SCARB2-226ENST00000640916 CHTF8P0CG12 524 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 S100A5P33763 92 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 PRR3P79522 188 aaKnown RBP5.05□□□□□ -1.6
SCARB2-226ENST00000640916 SRSF9Q13242 221 aaKnown RBP eCLIP5.05□□□□□ -1.6
SCARB2-226ENST00000640916 SPCS2Q15005 226 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 CTF1Q16619 201 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 GUK1Q16774 197 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 C14orf177Q52M58 125 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 NIT1Q86X76 327 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 CLVS1Q8IUQ0 354 aaPredicted RBP5.05□□□□□ -1.6
SCARB2-226ENST00000640916 OR51S1Q8NGJ8 323 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 RNF24Q9Y225 148 aa5.05□□□□□ -1.6
SCARB2-226ENST00000640916 TRBV19A0A075B6N1 114 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 FBLL1A6NHQ2 334 aaKnown RBP5.04□□□□□ -1.6
SCARB2-226ENST00000640916 GNRH2O43555 120 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 MED6O75586 246 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 SLC25A6P12236 298 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 TAS2R19P59542 299 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 ZNF266Q14584 549 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 RHOHQ15669 191 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 LBHQ53QV2 105 aaPredicted RBP5.04□□□□□ -1.6
SCARB2-226ENST00000640916 CFAP126Q5VTH2 177 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 S100A7AQ86SG5 101 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 ZNF546Q86UE3 836 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 SLC7A5P1Q8MH63 180 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 EXOC3-AS1Q8N2X6 119 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 RAB2BQ8WUD1 216 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 UBE2WQ96B02 151 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 ZC2HC1AQ96GY0 325 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 CIB3Q96Q77 187 aaPredicted RBP5.04□□□□□ -1.6
SCARB2-226ENST00000640916 PRADC1Q9BSG0 188 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 MRPS26Q9BYN8 205 aaKnown RBP5.04□□□□□ -1.6
SCARB2-226ENST00000640916 PLAC8Q9NZF1 115 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 KCNIP3Q9Y2W7 256 aa5.04□□□□□ -1.6
SCARB2-226ENST00000640916 TRAV6A0A075B6T7 132 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 AGPAT2O15120 278 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 OR10J4P0C629 311 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 RRAS2P62070 204 aaPredicted RBP5.03□□□□□ -1.6
SCARB2-226ENST00000640916 Q6AWC8 147 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 SPINK6Q6UWN8 80 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 ENHOQ6UWT2 76 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 Q8TAT8 98 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 SPACA4Q8TDM5 124 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 KRTAP4-11Q9BYQ6 195 aa5.03□□□□□ -1.6
SCARB2-226ENST00000640916 TRGV11A0A075B6L2 103 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 IGHV3-73A0A0B4J1V6 119 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 TRBV7-9A0A0J9YWB2 115 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 FNDC10F2Z333 226 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 CTDSPLO15194 276 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 RGS5O15539 181 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 COX7A2P2O60397 106 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 RPL19P84098 196 aaKnown RBP5.02□□□□□ -1.61
SCARB2-226ENST00000640916 ARL16Q0P5N6 197 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 TMEM78Q5T7P6 136 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 C10orf113Q5VZT2 155 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 KRTAP26-1Q6PEX3 210 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 REG3GQ6UW15 175 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 RNF185Q96GF1 192 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 C2orf50Q96LR7 162 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 MGST2Q99735 147 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 NPVFQ9HCQ7 196 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 PRELID1Q9Y255 219 aa5.02□□□□□ -1.61
SCARB2-226ENST00000640916 DUXBA0A1W2PPF3 345 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 CCDC160A6NGH7 325 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 GOSR2O14653 212 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 SLPIP03973 132 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 INPP1P49441 399 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 ZNF138P52744 262 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 POLR2GP62487 172 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCARB2-226ENST00000640916 CYB561D1Q8N8Q1 229 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 SOSTQ9BQB4 213 aa5.01□□□□□ -1.61
SCARB2-226ENST00000640916 MIXL1Q9H2W2 232 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms